RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	WWOX	Q9NZC7	414 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	PTBP2	Q9UKA9	531 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	PIAS3	Q9Y6X2	628 aa		11.73	□□□□□ -0.53
LMNA-224	ENST00000515711	GPR89A	B7ZAQ6	455 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711		E9PBE3	544 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	E2F3	O00716	465 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	SDHD	O14521	159 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	UBFD1	O14562	309 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	LIN7A	O14910	233 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	MBTPS2	O43462	519 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	SGTA	O43765	313 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	KLHL41	O60662	606 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	MMP20	O60882	483 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	GPC4	O75487	556 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	SKAP2	O75563	359 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	SLCO2B1	O94956	709 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	SOD1	P00441	154 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	OTC	P00480	354 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	DNTT	P04053	509 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	GPR89B	P0CG08	455 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	C7	P10643	843 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HOXB2	P14652	356 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	NCF2	P19878	526 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HIST1H2AD	P20671	130 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HNMT	P50135	292 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	SEC13	P55735	322 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	RPS14	P62263	151 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	BTK	Q06187	659 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HSPA14	Q0VDF9	509 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	ZRSR2	Q15696	482 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	RBBP7	Q16576	425 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	LSM12	Q3MHD2	195 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	DNAL1	Q4LDG9	190 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	CYHR1	Q6ZMK1	362 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	GPRIN3	Q6ZVF9	776 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	UBE2R2	Q712K3	238 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	LRRC70	Q7Z2Q7	622 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HDDC3	Q8N4P3	179 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	AADAT	Q8N5Z0	425 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	CPSF7	Q8N684	471 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	TRPC4AP	Q8TEL6	797 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	FAM131C	Q96AQ9	280 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	MOCOS	Q96EN8	888 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	C19orf60	Q96EN9	201 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HIST1H2AH	Q96KK5	128 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	HIST1H2AJ	Q99878	128 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	H2AFJ	Q9BTM1	129 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	PHF7	Q9BWX1	381 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	SLC12A9	Q9BXP2	914 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	PARVB	Q9HBI1	364 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	TRIM39	Q9HCM9	518 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	ACSS2	Q9NR19	701 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	ARL8B	Q9NVJ2	186 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	ARMCX1	Q9P291	453 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	EIF2B4	Q9UI10	523 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	COQ6	Q9Y2Z9	468 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	TRPM6	Q9BX84	2022 aa		11.72	□□□□□ -0.53
LMNA-224	ENST00000515711	C17orf113	A0A1B0GUU1	675 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	KLHL33	A6NCF5	533 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	PRR5-ARHGAP8	B1AHC4	643 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	TMEM233	B4DJY2	109 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	PLK4	O00444	970 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	INPP4B	O15327	924 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	MTX2	O75431	263 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	KATNA1	O75449	491 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	EGF	P01133	1207 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	ENO1	P06733	434 aa	Known RBP	11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	UROS	P10746	265 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	EPHA3	P29320	983 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	AVPR2	P30518	371 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	WAS	P42768	502 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	ATP4B	P51164	291 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	COPA	P53621	1224 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	CDH13	P55290	713 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	RPS21	P63220	83 aa	Known RBP	11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	SH3BP2	P78314	561 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	ARHGAP8	P85298	464 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	ZXDA	P98168	799 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	GTF2H2	Q13888	395 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	UBAP2L	Q14157	1087 aa	Known RBP	11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	SQLE	Q14534	574 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	HERC3	Q15034	1050 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	PON2	Q15165	354 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	MAPRE2	Q15555	327 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	SMAD2	Q15796	467 aa	Known RBP	11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	KHDC1	Q4VXA5	237 aa	Known RBP	11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	EOGT	Q5NDL2	527 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	NXN	Q6DKJ4	435 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	GTF2H2C	Q6P1K8	395 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	RNF165	Q6ZSG1	346 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	KBTBD6	Q86V97	674 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	SPNS2	Q8IVW8	549 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	RASGEF1A	Q8N9B8	481 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	IL17RC	Q8NAC3	791 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	MCOLN3	Q8TDD5	553 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	TWIST2	Q8WVJ9	160 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	ASB11	Q8WXH4	323 aa		11.71	□□□□□ -0.53
LMNA-224	ENST00000515711	EZH1	Q92800	747 aa	Predicted RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms