RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 JUNDP17535 347 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 TFEBP19484 476 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 HIST1H2ADP20671 130 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 CYP2A7P20853 494 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 RPA3P35244 121 aaPredicted RBP13.2□□□□□ -0.3
LETM1-204ENST00000510940 NXPH1P58417 271 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 NAA20P61599 178 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 IL9RQ01113 521 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 ACSBG2Q5FVE4 666 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 CDKL4Q5MAI5 379 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 UNC5DQ6UXZ4 953 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 WASH2PQ6VEQ5 465 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 PRR23BQ6ZRT6 265 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 RD3Q7Z3Z2 195 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 PHACTR4Q8IZ21 702 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 SLC22A18ASQ8N1D0 253 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 AVL9Q8NBF6 648 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 PHC3Q8NDX5 983 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 MCOLN3Q8TDD5 553 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 DYDC1Q8WWB3 177 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 TSACCQ96A04 125 aaPredicted RBP13.2□□□□□ -0.3
LETM1-204ENST00000510940 PDXPQ96GD0 296 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 HIST1H2AHQ96KK5 128 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 HIST1H2AJQ99878 128 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 H2AFJQ9BTM1 129 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 ZDHHC5Q9C0B5 715 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 OSGEPL1Q9H4B0 414 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 RDH14Q9HBH5 336 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 WASH6PQ9NQA3 447 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 IGSF5Q9NSI5 407 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 INTS9Q9NV88 658 aaKnown RBP13.2□□□□□ -0.3
LETM1-204ENST00000510940 DNAJC28Q9NX36 388 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 GALPQ9UBC7 116 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 SPASTQ9UBP0 616 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 PCDHGA5Q9Y5G8 931 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 ANKRD12Q6UB98 2062 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 ZNF318Q5VUA4 2279 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 FANCMQ8IYD8 2048 aa13.2□□□□□ -0.3
LETM1-204ENST00000510940 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 FOXO6A8MYZ6 492 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 BIRC5O15392 142 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 PLIN3O60664 434 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 H2AFYO75367 372 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 TSPAN12O95859 305 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 CSF2P04141 144 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 MYL2P10916 166 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 NEFHP12036 1026 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 NME1P15531 152 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 NDUFS1P28331 727 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 ARRB1P49407 418 aaPredicted RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 AP1S2P56377 157 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 IRF9Q00978 393 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 SRSF5Q13243 272 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 NFE2L1Q14494 772 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 PLA2G4EQ3MJ16 856 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 TMEM207Q6UWW9 146 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 RAB44Q7Z6P3 723 aaPredicted RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 ISCA2Q86U28 154 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 PDZD3Q86UT5 571 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 GKN2Q86XP6 184 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 GPSM1Q86YR5 675 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 SLC22A9Q8IVM8 553 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 PLD6Q8N2A8 252 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 TCAIMQ8N3R3 496 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 RAB42Q8N4Z0 105 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 ANKRD42Q8N9B4 389 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 ANKRD49Q8WVL7 239 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 PIGKQ92643 395 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 FAM111AQ96PZ2 611 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 SLC30A3Q99726 388 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 PARVBQ9HBI1 364 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 MRPL40Q9NQ50 206 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 TMEM216Q9P0N5 145 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 FAM8A1Q9UBU6 413 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 APOBEC3BQ9UH17 382 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 DNAJC16Q9Y2G8 782 aa13.19□□□□□ -0.3
LETM1-204ENST00000510940 TDRD6O60522 2096 aaKnown RBP13.19□□□□□ -0.3
LETM1-204ENST00000510940 LRP4O75096 1905 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 PDZK1P1A8MUH7 402 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 SNX2O60749 519 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 MATN4O95460 622 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 PROCP04070 461 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 WNT1P04628 370 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 SYPP08247 313 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 CPA3P15088 417 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 CREB1P16220 341 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 GLRBP48167 497 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 CSNK1EP49674 416 aaKnown RBP13.18□□□□□ -0.3
LETM1-204ENST00000510940 CDKL1Q00532 357 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 CTBSQ01459 385 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 EIF2B5Q13144 721 aaKnown RBP13.18□□□□□ -0.3
LETM1-204ENST00000510940 ZNF658BQ4V348 819 aaPredicted RBP13.18□□□□□ -0.3
LETM1-204ENST00000510940 TECRLQ5HYJ1 363 aa13.18□□□□□ -0.3
LETM1-204ENST00000510940 UBE2R2Q712K3 238 aaPredicted RBP13.18□□□□□ -0.3
LETM1-204ENST00000510940 PIWIL4Q7Z3Z4 852 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms