RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 SOCS5O75159 536 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 TOXO94900 526 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 RASAL1O95294 804 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 SYT1P21579 422 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 KPNA2P52292 529 aaKnown RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 DRG2P55039 364 aaKnown RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 PPP2R2BQ00005 443 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 TRAF2Q12933 501 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 SLC9A5Q14940 896 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 CDO1Q16878 200 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 C15orf59Q2T9L4 293 aaPredicted RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 C2CD6Q53TS8 623 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 TBCELQ5QJ74 424 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 ZNF648Q5T619 568 aaPredicted RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 KLHL35Q6PF15 583 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 SMYD4Q8IYR2 804 aaPredicted RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 CIARTQ8N365 385 aaPredicted RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 EMC1Q8N766 993 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 ACRBPQ8NEB7 543 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 ANKRD20A12PQ8NF67 263 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 AGAP11Q8TF27 550 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 COX4I2Q96KJ9 171 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 C17orf62Q9BQA9 187 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 SLC7A5P2Q9GIP4 190 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 UPF2Q9HAU5 1272 aaKnown RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 ARFGAP3Q9NP61 516 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 UBE2TQ9NPD8 197 aaPredicted RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 FAM207AQ9NSI2 230 aaPredicted RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 LRFN1Q9P244 771 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
PTPN20-221ENST00000509599 WDR37Q9Y2I8 494 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 PPIL1Q9Y3C6 166 aa9.25□□□□□ -0.93
PTPN20-221ENST00000509599 C17orf113A0A1B0GUU1 675 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.24□□□□□ -0.93
PTPN20-221ENST00000509599 A0A1W2PQ67 120 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 DYTNA2CJ06 578 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 SLC9B1P1A6NJY1 282 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 E9PLN8 166 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 GOLGA8SH3BPF8 625 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 MTA2O94776 668 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 YEATS4O95619 227 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 F10P00742 488 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 MYL1P05976 194 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 MSL3P1P0C860 447 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 ZNF30P17039 623 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 MMP11P24347 488 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 GABRB2P47870 512 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 STC1P52823 247 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 PMS1P54277 932 aaKnown RBP9.24□□□□□ -0.93
PTPN20-221ENST00000509599 INSCQ1MX18 579 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 DEFB113Q30KQ7 82 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 TDRD12Q587J7 1177 aaKnown RBP9.24□□□□□ -0.93
PTPN20-221ENST00000509599 AGAP9Q5VTM2 703 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 C1orf189Q5VU69 101 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 KIRREL2Q6UWL6 708 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 WASH2PQ6VEQ5 465 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 USP45Q70EL2 814 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 THAP3Q8WTV1 239 aaPredicted RBP9.24□□□□□ -0.93
PTPN20-221ENST00000509599 CELF6Q96J87 481 aaKnown RBP9.24□□□□□ -0.93
PTPN20-221ENST00000509599 VKORC1Q9BQB6 163 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 GPATCH1Q9BRR8 931 aaKnown RBP9.24□□□□□ -0.93
PTPN20-221ENST00000509599 UCK2Q9BZX2 261 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 OR2AG1Q9H205 316 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 HRASLS2Q9NWW9 162 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 COQ3Q9NZJ6 369 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 TRIM10Q9UDY6 481 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 NDOR1Q9UHB4 597 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 PPT2Q9UMR5 302 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 PCDHA7Q9UN72 937 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 HS3ST3B1Q9Y662 390 aa9.24□□□□□ -0.93
PTPN20-221ENST00000509599 ANK3Q12955 4377 aaKnown RBP9.23□□□□□ -0.93
PTPN20-221ENST00000509599 FAM237BA0A1B0GVD1 139 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 FAM90A27PA6NNH2 459 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 E7EQ34 232 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 CHUKO15111 745 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 P4HA2O15460 535 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 PMPCBO75439 489 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 PGLSO95336 258 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 SIX3O95343 332 aaPredicted RBP9.23□□□□□ -0.93
PTPN20-221ENST00000509599 CD63P08962 238 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 HBQ1P09105 142 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 ZNF7P17097 686 aaPredicted RBP9.23□□□□□ -0.93
PTPN20-221ENST00000509599 IL4RP24394 825 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 USP8P40818 1118 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 PREPP48147 710 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 PAPOLAP51003 745 aaKnown RBP9.23□□□□□ -0.93
PTPN20-221ENST00000509599 FKBP3Q00688 224 aaKnown RBP9.23□□□□□ -0.93
PTPN20-221ENST00000509599 HENMT1Q5T8I9 393 aaKnown RBP9.23□□□□□ -0.93
PTPN20-221ENST00000509599 GJB7Q6PEY0 223 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 PAMR1Q6UXH9 720 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 ARHGAP36Q6ZRI8 547 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 ARCQ7LC44 396 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 DOLPP1Q86YN1 238 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 ZNF547Q8IVP9 402 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 CARFQ8N187 725 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 CPLX3Q8WVH0 158 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 PIH1D2Q8WWB5 315 aa9.23□□□□□ -0.93
PTPN20-221ENST00000509599 PSMF1Q92530 271 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms