RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TMEM225BP0DP42 221 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 HOXB2P14652 356 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 GABRG2P18507 467 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ITGB6P18564 788 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CORO1AP31146 461 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 HTR7P34969 479 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CHKAP35790 457 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 PBX1P40424 430 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 P2RY2P41231 377 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 PTGER3P43115 390 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 MTIF2P46199 727 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 HSPA7P48741 367 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 RPL34P49207 117 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 DHPSP49366 369 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 RGS7P49802 495 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 RENBPP51606 427 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 MFAP3P55082 362 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 DAOAP59103 153 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 MYL5Q02045 173 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ADIGQ0VDE8 80 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ENPP2Q13822 863 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 BYSLQ13895 437 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 KCNJ12Q14500 433 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 KRT31Q15323 416 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ELF2Q15723 593 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 TPD52L1Q16890 204 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 EXOC3L4Q17RC7 722 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 MPEG1Q2M385 716 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ZSCAN23Q3MJ62 389 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 AASDHQ4L235 1098 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 AWAT1Q58HT5 328 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 STPG1Q5TH74 334 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 BSPRYQ5W0U4 402 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ABLIM2Q6H8Q1 611 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 TCEAL6Q6IPX3 200 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 GRHL2Q6ISB3 625 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CAVIN1Q6NZI2 390 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 PMF1Q6P1K2 205 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 TRIM65Q6PJ69 517 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 GBP6Q6ZN66 633 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 C11orf57Q6ZUT1 292 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ENOSF1Q7L5Y1 443 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 TRMT11Q7Z4G4 463 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 BCDIN3DQ7Z5W3 292 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CHSY1Q86X52 802 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 FAM217AQ8IXS0 508 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 FAM71AQ8IYT1 594 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 SIX6OS1Q8N1H7 587 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 MBD3L2Q8NHZ7 208 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 IPO4Q8TEX9 1081 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CLEC4CQ8WTT0 213 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 DDI1Q8WTU0 396 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 HMGB4Q8WW32 186 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 IRGQQ8WZA9 623 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 SHC3Q92529 594 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 DPF1Q92782 380 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 TCEAL3Q969E4 200 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 GRAMD1AQ96CP6 724 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 C18orf8Q96DM3 657 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ZDHHC12Q96GR4 267 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 PRR11Q96HE9 360 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 PIWIL1Q96J94 861 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 VPS50Q96JG6 964 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 HSFY1Q96LI6 401 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 FAM81BQ96LP2 452 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 SNX18Q96RF0 628 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CRACR2AQ9BSW2 395 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 DCLK3Q9C098 648 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 INTS2Q9H0H0 1204 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 LRRC4Q9HBW1 653 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 UBE2TQ9NPD8 197 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 PLCB1Q9NQ66 1216 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 SNX15Q9NRS6 342 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ABCC13Q9NSE7 274 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 OLA1Q9NTK5 396 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 BCCIPQ9P287 314 aaKnown RBP eCLIP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 THAP10Q9P2Z0 257 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 STOML2Q9UJZ1 356 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CLEC4EQ9ULY5 219 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 LAMA1P25391 3075 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 IGHV1OR15-9A0A0B4J2B8 117 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 GOLGA6L7A0A1B0GV03 622 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 LNP1A1A4G5 178 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 C4orf47A7E2U8 309 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 LGALS16A8MUM7 142 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 BECN2A8MW95 431 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 CDX4O14627 284 aaPredicted RBP3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 NPC1O15118 1278 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 MSI1O43347 362 aaKnown RBP3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 TIMM44O43615 452 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 TMPRSS11DO60235 418 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF292O60281 2723 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF217O75362 1048 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 GCATO75600 419 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 WDR47O94967 919 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 LATS1O95835 1130 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 IGLV3-27P01718 113 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 ATP1A3P13637 1013 aa3.57□□□□□ -1.84
UBE2D3-226ENST00000508635 KRT5P13647 590 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms