RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 BET1O15155 118 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ASNA1O43681 348 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TMPRSS11DO60235 418 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SH3BP5O60239 455 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TLR2O60603 784 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 GPC4O75487 556 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CIAO1O76071 339 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PGM3O95394 542 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 H6PDO95479 791 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CBX6O95503 412 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 FYNP06241 537 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 IFIT1P09914 478 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 FAM228BP0C875 321 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SMIM18P0DKX4 95 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 HGFP14210 728 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CTRB1P17538 263 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ATF7P17544 494 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PSMC3P17980 439 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CA4P22748 312 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CTNNA2P26232 953 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SERPINB1P30740 379 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 IFNA8P32881 189 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ALDH3B2P48448 385 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 NEK3P51956 506 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 AGFG1P52594 562 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SRP54P61011 504 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 S100A12P80511 92 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CFHR1Q03591 330 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PDE1CQ14123 709 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 NFE2L1Q14494 772 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TRIP13Q15645 432 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TMEM266Q2M3C6 531 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 GRAMD1BQ3KR37 738 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 C5orf22Q49AR2 442 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 MIDNQ504T8 468 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ZC2HC1CQ53FD0 456 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 C1orf141Q5JVX7 400 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 C6orf183Q5T699 404 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CTRB2Q6GPI1 263 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 FAM122CQ6P4D5 195 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ALKBH5Q6P6C2 394 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 DCLRE1AQ6PJP8 1040 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CCDC137Q6PK04 289 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CLEC4GQ6UXB4 293 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 C4orf22Q6V702 233 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 IDO2Q6ZQW0 420 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 FAM47EQ6ZV65 393 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 OVCH2Q7RTZ1 564 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 AKAP14Q86UN6 197 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 NT5DC3Q86UY8 548 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 GPBP1Q86WP2 473 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 MICU3Q86XE3 530 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CCDC28AQ8IWP9 274 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PM20D2Q8IYS1 436 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 KIAA2013Q8IYS2 634 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CARNMT1Q8N4J0 409 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 LSMEM1Q8N8F7 131 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CD99L2Q8TCZ2 262 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC2A14Q8TDB8 520 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ADAMTS16Q8TE57 1224 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TAMM41Q96BW9 452 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 DCPSQ96C86 337 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 RMND5BQ96G75 393 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CALML4Q96GE6 196 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 OXNAD1Q96HP4 312 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ZNF347Q96SE7 839 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 NAP1L4Q99733 375 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TSSK1BQ9BXA7 367 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 AP1M1Q9BXS5 423 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 MROQ9BYG7 248 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PAIP1Q9H074 479 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CDH19Q9H159 772 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CDC42EP4Q9H3Q1 356 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TRABDQ9H4I3 376 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SP140LQ9H930 580 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 MARCH7Q9H992 704 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TCF7L2Q9NQB0 619 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SH3GLB2Q9NR46 395 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SACM1LQ9NTJ5 587 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 POT1Q9NUX5 634 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SEPT11Q9NVA2 429 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PARVAQ9NVD7 372 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 THAP1Q9NVV9 213 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 SMARCAL1Q9NZC9 954 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 GRHL1Q9NZI5 618 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 NPAP1Q9NZP6 1156 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ANKMY1Q9P2S6 941 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PRPF19Q9UMS4 504 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 PSMD13Q9UNM6 376 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 TDRKHQ9Y2W6 561 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CEPT1Q9Y6K0 416 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 LAMA3Q16787 3333 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 MN1Q10571 1320 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 LOC102723971A0A1B0GUV8 181 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 EXOC1LA0A1B0GW35 172 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MAGEB16A2A368 324 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 GTPBP10A4D1E9 387 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MBD3L4A6NDZ8 208 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MBD3L3A6NE82 208 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SAGE2PA6NJ88 616 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms