RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 IGLV1-44P01699 117 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 CD4P01730 458 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 ACTN1P12814 892 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 RARGP13631 454 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 TMEM11P17152 192 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 MFAP5Q13361 173 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 MEP1AQ16819 746 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 SARM1Q6SZW1 724 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 MFSD6Q6ZSS7 791 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 PDILTQ8N807 584 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 WDR20Q8TBZ3 569 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 NUDCD1Q96RS6 583 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 PLK3Q9H4B4 646 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 ORC3Q9UBD5 711 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 TIAM1Q13009 1591 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 MAST1Q9Y2H9 1570 aa4.78□□□□□ -1.64
TOPBP1-206ENST00000508524 SPAG9O60271 1321 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 SHPRHQ149N8 1683 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 BCL9LQ86UU0 1499 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 CLIC2O15247 247 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 RNASEH2AO75792 299 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 LIFP15018 202 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 CHMP24386 653 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 MAP2K2P36507 400 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 THOP1P52888 689 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 DRG2P55039 364 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 ZSCAN23Q3MJ62 389 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 KIAA1644Q3SXP7 199 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 SNX30Q5VWJ9 437 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 ZDHHC20Q5W0Z9 365 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 MYPOPQ86VE0 399 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 SLC22A12Q96S37 553 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 ITPAQ9BY32 194 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 PELI2Q9HAT8 420 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 SIX2Q9NPC8 291 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 AASSQ9UDR5 926 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 FGD6Q6ZV73 1430 aa4.77□□□□□ -1.65
TOPBP1-206ENST00000508524 ARHGAP23Q9P227 1491 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 FRMD3A2A2Y4 597 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 MAGEB17A8MXT2 336 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 GPC4O75487 556 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 OR2C1O95371 312 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 NADKO95544 446 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 SRPRAP08240 638 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF26P17031 533 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 CBLP22681 906 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 EPHA2P29317 976 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 HOXA13P31271 388 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 TAF6P49848 677 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 GAGE2BQ13066 116 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 HSP90AB4PQ58FF6 505 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 CDC42BPAQ5VT25 1732 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 FAM109BQ6ICB4 259 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 KIAA0930Q6ICG6 404 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 KLHL35Q6PF15 583 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 DEFB132Q7Z7B7 95 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 UCMAQ8WVF2 138 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 SEMA4DQ92854 862 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 SLC47A1Q96FL8 570 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 HGH1Q9BTY7 390 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 PAG1Q9NWQ8 432 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 MMP24Q9Y5R2 645 aa4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 PRDM15P57071 1507 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-206ENST00000508524 NHSL1Q5SYE7 1610 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 AHDC1Q5TGY3 1603 aaPredicted RBP4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 LRRC9Q6ZRR7 1453 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 UBR1Q8IWV7 1749 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 PSMD14O00487 310 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 CREB3O43889 395 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 GPR137BO60478 399 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 CEACAM1P13688 526 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 CKMT2P17540 419 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 MAN1A1P33908 653 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 CAMPP49913 170 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 ITGA9Q13797 1035 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 PLD3Q8IV08 490 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 CRYBG2Q8N1P7 616 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF843Q8N446 348 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 L3MBTL4Q8NA19 623 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 MAPK1IP1LQ8NDC0 245 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 POMGNT1Q8WZA1 660 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 CMTM3Q96MX0 182 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF599Q96NL3 588 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 DACH2Q96NX9 599 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 RHNO1Q9BSD3 238 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 SLA2Q9H6Q3 261 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 SH2D4AQ9H788 454 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 OLA1Q9NTK5 396 aaKnown RBP4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 MIOSQ9NXC5 875 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 KCNJ14Q9UNX9 436 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 CMAHPQ9Y471 501 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 SESN1Q9Y6P5 492 aa4.75□□□□□ -1.65
TOPBP1-206ENST00000508524 ADGBQ8N7X0 1667 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 SLIT1O75093 1534 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 A0A1W2PR77 199 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 PLOD2O00469 737 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms