RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ECHDC1Q9NTX5 307 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 SPIN1Q9Y657 262 aaPredicted RBP4.52□□□□□ -1.69
DHFR-204ENST00000508282 RPS6KL1Q9Y6S9 549 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 DISP3Q9P2K9 1392 aa4.52□□□□□ -1.69
DHFR-204ENST00000508282 ASTN2O75129 1339 aaPredicted RBP4.51□□□□□ -1.69
DHFR-204ENST00000508282 ELOVL7A1L3X0 281 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 PSMD14O00487 310 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 AP3D1O14617 1153 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 VILLO15195 856 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 DOK2O60496 412 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 ZNF821O75541 412 aaPredicted RBP4.51□□□□□ -1.69
DHFR-204ENST00000508282 CLPTM1O96005 669 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 NGFP01138 241 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 PLA2G4BP0C869 781 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 PSMB10P40306 273 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 MFAP4P55083 255 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 CDH11P55287 796 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 MELKQ14680 651 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 HYIQ5T013 277 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 ZNF790Q6PG37 636 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 INTS8Q75QN2 995 aaKnown RBP4.51□□□□□ -1.69
DHFR-204ENST00000508282 AACSQ86V21 672 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 ZNF485Q8NCK3 441 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 ERLEC1Q96DZ1 483 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 RTP3Q9BQQ7 232 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 C16orf70Q9BSU1 422 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 INTS10Q9NVR2 710 aaKnown RBP4.51□□□□□ -1.69
DHFR-204ENST00000508282 FBXO2Q9UK22 296 aaPredicted RBP4.51□□□□□ -1.69
DHFR-204ENST00000508282 SLC7A7Q9UM01 511 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 RABGAP1Q9Y3P9 1069 aa4.51□□□□□ -1.69
DHFR-204ENST00000508282 SOS1Q07889 1333 aaPredicted RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 ITIH6Q6UXX5 1313 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 IGKV3D-15A0A087WSY6 115 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 MED19A0JLT2 244 aaPredicted RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 LNP1A1A4G5 178 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 LRRC72A6NJI9 287 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 AGAP14A8MT82 685 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 PAPSS1O43252 624 aaPredicted RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 ZNF500O60304 480 aaPredicted RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 CXCL9Q07325 125 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 PLA2G7Q13093 441 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 ITGA9Q13797 1035 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 RAB41Q5JT25 222 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 FFAR4Q5NUL3 377 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 GRTP1Q5TC63 336 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 CORO6Q6QEF8 472 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 CPSF7Q8N684 471 aaKnown RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 DDHD1Q8NEL9 900 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 HCAR2Q8TDS4 363 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 CCDC34Q96HJ3 373 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 ACKR4Q9NPB9 350 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 ZNF71Q9NQZ8 489 aaPredicted RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 RHCGQ9UBD6 479 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 SEC63Q9UGP8 760 aaKnown RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 PLAGL1Q9UM63 463 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 MRPS28Q9Y2Q9 187 aaKnown RBP4.5□□□□□ -1.69
DHFR-204ENST00000508282 PYGO1Q9Y3Y4 419 aa4.5□□□□□ -1.69
DHFR-204ENST00000508282 IGLV9-49A0A0B4J1Y8 123 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 DNM1LO00429 736 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 ZBED4O75132 1171 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 CREG1O75629 220 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 CEACAM8P31997 349 aaPredicted RBP4.49□□□□□ -1.69
DHFR-204ENST00000508282 TMF1P82094 1093 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 LGALS3BPQ08380 585 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 TMEM187Q14656 261 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 ZFP69Q49AA0 526 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 LINGO4Q6UY18 593 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 DNAJC22Q8N4W6 341 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 ZNF383Q8NA42 475 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 HSD17B8Q92506 261 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 TMEM143Q96AN5 459 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 SAT2Q96F10 170 aaPredicted RBP4.49□□□□□ -1.69
DHFR-204ENST00000508282 ART5Q96L15 291 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 SGK494Q96LW2 274 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 MYADMQ96S97 322 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 RTN4RQ9BZR6 473 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 FGF22Q9HCT0 170 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 CHMP1AQ9HD42 196 aaPredicted RBP4.49□□□□□ -1.69
DHFR-204ENST00000508282 LARSQ9P2J5 1176 aaKnown RBP4.49□□□□□ -1.69
DHFR-204ENST00000508282 NRBP1Q9UHY1 535 aa4.49□□□□□ -1.69
DHFR-204ENST00000508282 IGHV4-61A0A0C4DH41 118 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 TIMM44O43615 452 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 EML2O95834 649 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 TBX6O95947 436 aaPredicted RBP4.48□□□□□ -1.69
DHFR-204ENST00000508282 IGHV4-59P01825 116 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 WNT5AP41221 380 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 SLC15A1P46059 708 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 KRT33BQ14525 404 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 KCTD2Q14681 263 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 P2RY6Q15077 328 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 GTDC1Q4AE62 458 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 DUSP28Q4G0W2 176 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 CCDC89Q8N998 374 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 C1orf131Q8NDD1 294 aaKnown RBP4.48□□□□□ -1.69
DHFR-204ENST00000508282 MTERF3Q96E29 417 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 OR6C1Q96RD1 312 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 SYNCQ9H7C4 482 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 WSB2Q9NYS7 404 aaPredicted RBP4.48□□□□□ -1.69
DHFR-204ENST00000508282 TMEM181Q9P2C4 612 aa4.48□□□□□ -1.69
DHFR-204ENST00000508282 SUCLA2Q9P2R7 463 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms