RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ELMOD1Q8N336 334 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TEX26Q8N6G2 289 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARL10Q8N8L6 244 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZMIZ2Q8NF64 920 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPRC5AQ8NFJ5 357 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR52K2Q8NGK3 314 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR6Q1Q8NGQ2 317 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR4L1Q8NH43 312 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC22A17Q8WUG5 538 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 FBLIM1Q8WUP2 373 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 C17orf50Q8WW18 174 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM162AQ96A26 154 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 MYLPFQ96A32 169 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 FKBP10Q96AY3 582 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ISG20Q96AZ6 181 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TADA1Q96BN2 335 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TBC1D20Q96BZ9 403 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 DCPSQ96C86 337 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RMDN1Q96DB5 314 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PABPC5Q96DU9 382 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 YME1L1Q96TA2 773 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 OSMRQ99650 979 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 HEPHQ9BQS7 1158 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 DGCR6LQ9BY27 220 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZYG11BQ9C0D3 744 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 POLR1EQ9GZS1 481 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 KLHL25Q9H0H3 589 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 GABARAPL1Q9H0R8 117 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 MMP27Q9H306 513 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TUBB1Q9H4B7 451 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 KAT8Q9H7Z6 458 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ACTR8Q9H981 624 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 AGO3Q9H9G7 860 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NTN4Q9HB63 628 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NT5MQ9NPB1 228 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SEMA4BQ9NPR2 832 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 POLR3BQ9NW08 1133 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM248Q9NWD8 314 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NUDT4Q9NZJ9 180 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CD274Q9NZQ7 290 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 KLK14Q9P0G3 267 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADGRE2Q9UHX3 823 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRMT6Q9UJA5 497 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF232Q9UNY5 417 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NEU3Q9UQ49 428 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ERVK-11Q9UQG0 969 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 BTRCQ9Y297 605 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TLR6Q9Y2C9 796 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CRYL1Q9Y2S2 319 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CORINQ9Y5Q5 1042 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SNX10Q9Y5X0 201 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 MN1Q10571 1320 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 DICER1Q9UPY3 1922 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 A0A1W2PNR3 127 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM92AA1XBS5 289 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MYBPHLA2RUH7 354 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ASPDHA6ND91 283 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLDN24A6NM45 220 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM220BPB1ANY3 271 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 H0Y858 1186 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NFKBIEO00221 500 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 UPK1AO00322 258 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 BTN3A1O00481 513 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CXCR6O00574 342 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 RGS10O43665 173 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 LDB2O43679 373 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ASNA1O43681 348 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 HS6ST1O60243 411 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NUAK1O60285 661 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ERN1O75460 977 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 WDR47O94967 919 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SIX3O95343 332 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SEC24AO95486 1093 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ANGPTL1O95841 491 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTTG1O95997 202 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 OTCP00480 354 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 APOA1P02647 267 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 THBS1P07996 1170 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SERPINF2P08697 491 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PABPC1P11940 636 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MTHFD2P13995 350 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CHRM3P20309 590 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TGM1P22735 817 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 IGFBP5P24593 272 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 HTR1BP28222 390 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 S100A5P33763 92 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 IDUAP35475 653 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 UGT2B10P36537 528 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADCYAP1R1P41586 468 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCNC1P48547 511 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NRIP1P48552 1158 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAPKAPK2P49137 400 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCNN1GP51170 649 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 DIO3P55073 304 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 FOXA1P55317 472 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR4D2P58180 307 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms