RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TMEM79Q9BSE2 394 aa14.25□□□□□ -0.13
DDX41-208ENST00000507955 LIN28AQ9H9Z2 209 aaKnown RBP14.25□□□□□ -0.13
DDX41-208ENST00000507955 ZFP14Q9HCL3 533 aa14.25□□□□□ -0.13
DDX41-208ENST00000507955 ABCD2Q9UBJ2 740 aa14.25□□□□□ -0.13
DDX41-208ENST00000507955 PCDHA9Q9Y5H5 950 aa14.25□□□□□ -0.13
DDX41-208ENST00000507955 ARPC2O15144 300 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 HNRNPRO43390 633 aaKnown RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 IGSF6O95976 241 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 GSK3BP49841 420 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 CDH15P55291 814 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ERVK-8P63133 956 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ARHGEF7Q14155 803 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 AP5B1Q2VPB7 878 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ZNF648Q5T619 568 aaPredicted RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 MILR1Q7Z6M3 343 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ZBTB2Q8N680 514 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 SKA2Q8WVK7 121 aaPredicted RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 DTNBP1Q96EV8 351 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 DUS3LQ96G46 650 aaKnown RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 HOPXQ9BPY8 73 aaPredicted RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 ZBP1Q9H171 429 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 NUDT4Q9NZJ9 180 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 CIDEBQ9UHD4 219 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 GNPTGQ9UJJ9 305 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 PCDHB1Q9Y5F3 818 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 SPTBN5Q9NRC6 3674 aaKnown RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 ABHD14A-ACY1A0A1B0GW23 586 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 BBIP1A8MTZ0 92 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 INPP4BO15327 924 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 LATS1O95835 1130 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 CDK4P11802 303 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 SERPINA4P29622 427 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 MTPNP58546 118 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 LIPEQ05469 1076 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ZXDCQ2QGD7 858 aaPredicted RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 TBCELQ5QJ74 424 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 GPRC6AQ5T6X5 926 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 NANOGP8Q6NSW7 305 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 CERS6Q6ZMG9 384 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ADAMTSL2Q86TH1 951 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 NXPE1Q8N323 547 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ZNF366Q8N895 744 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 DRAXINQ8NBI3 349 aaPredicted RBP14.24□□□□□ -0.13
DDX41-208ENST00000507955 KREMEN2Q8NCW0 462 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 CLHC1Q8NHS4 586 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 PYCR2Q96C36 320 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 ALG2Q9H553 416 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 CAAP1Q9H8G2 361 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 NANOGQ9H9S0 305 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 MRGBPQ9NV56 204 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 PADI4Q9UM07 663 aa14.24□□□□□ -0.13
DDX41-208ENST00000507955 USP34Q70CQ2 3546 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 TRAV19A0A0A6YYK7 116 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 ARHGAP10A1A4S6 786 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 H3BNH8 94 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 DLGAP1O14490 977 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 LSM1O15116 133 aaKnown RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 PARNO95453 639 aaKnown RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 GNAO1P09471 354 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 CD9P21926 228 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 SPAM1P38567 509 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 RPL38P63173 70 aaKnown RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 NTHL1P78549 312 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 HSPA14Q0VDF9 509 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 NHSL2Q5HYW2 709 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 ZNF697Q5TEC3 545 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 BORAQ6PGQ7 559 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 SPATA19Q7Z5L4 167 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 VRK3Q8IV63 474 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 SCAMP4Q969E2 229 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 PBXIP1Q96AQ6 731 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 CCT7Q99832 543 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 OSBPL11Q9BXB4 747 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 NUSAP1Q9BXS6 441 aaKnown RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 WWOXQ9NZC7 414 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 KLQ9UEF7 1012 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 PTBP2Q9UKA9 531 aaKnown RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 ST14Q9Y5Y6 855 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 LOC730098B7Z3J9 87 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 H0YJX3 145 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 RAD51BO15315 384 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 H6PDO95479 791 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 SLC2A4P14672 509 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 ZNF23P17027 643 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 HMOX2P30519 316 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 CCR7P32248 378 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 CLCN2P51788 898 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 SLC7A9P82251 487 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 PRKCQQ04759 706 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 CBX2Q14781 532 aaPredicted RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 PCBP2Q15366 365 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDX41-208ENST00000507955 SERPINA13PQ6UXR4 307 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 EPHX4Q8IUS5 362 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 SLC22A15Q8IZD6 547 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 TMEM199Q8N511 208 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 BEND7Q8N7W2 519 aaPredicted RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 ERLEC1Q96DZ1 483 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 PDLIM5Q96HC4 596 aaKnown RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 SEPHS2Q99611 448 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 BEGAINQ9BUH8 593 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms