RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZNF697Q5TEC3 545 aa17.33■□□□□ 0.36
SFXN1-208ENST00000507823 MILR1Q7Z6M3 343 aa17.33■□□□□ 0.36
SFXN1-208ENST00000507823 TIFAQ96CG3 184 aa17.33■□□□□ 0.36
SFXN1-208ENST00000507823 GID8Q9NWU2 228 aa17.33■□□□□ 0.36
SFXN1-208ENST00000507823 DUS2Q9NX74 493 aaKnown RBP17.33■□□□□ 0.36
SFXN1-208ENST00000507823 WWOXQ9NZC7 414 aa17.33■□□□□ 0.36
SFXN1-208ENST00000507823 EPS15L1Q9UBC2 864 aa17.33■□□□□ 0.36
SFXN1-208ENST00000507823 MBD1Q9UIS9 605 aaPredicted RBP17.33■□□□□ 0.36
SFXN1-208ENST00000507823 KIF26AQ9ULI4 1882 aaPredicted RBP17.32■□□□□ 0.36
SFXN1-208ENST00000507823 FAM234BA2RU67 622 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 ASPDHA6ND91 283 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 KPNA5O15131 536 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 GUCA1CO95843 209 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 EBLN1P0CF75 366 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 PEX2P28328 305 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 TICAM1Q8IUC6 712 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 GALNT13Q8IUC8 556 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 TCAIMQ8N3R3 496 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 ASB11Q8WXH4 323 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 TEX37Q96LM6 180 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 VPS35Q96QK1 796 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 PRRC2BQ5JSZ5 2229 aaKnown RBP17.32■□□□□ 0.36
SFXN1-208ENST00000507823 PDE4DIPQ5VU43 2346 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 GFYI3L273 518 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 PER2O15055 1255 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 SLC22A3O75751 556 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 ADH1CP00326 375 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 SLC7A2P52569 658 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 RHDQ02161 417 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 KLC1Q07866 573 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 LRRC73Q5JTD7 316 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 SCIMPQ6UWF3 145 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 TRIM46Q7Z4K8 759 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 PLCD3Q8N3E9 789 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 NR1H4Q96RI1 486 aaPredicted RBP17.32■□□□□ 0.36
SFXN1-208ENST00000507823 EGFL8Q99944 293 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 APOL5Q9BWW9 433 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 SPATA16Q9BXB7 569 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 TSR3Q9UJK0 312 aaKnown RBP17.32■□□□□ 0.36
SFXN1-208ENST00000507823 PDE10AQ9Y233 779 aa17.32■□□□□ 0.36
SFXN1-208ENST00000507823 ANKRD28O15084 1053 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 NPPAP01160 153 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 ANXA5P08758 320 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 MYOGP15173 224 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 MMP12P39900 470 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 NME5P56597 212 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 MRPS35P82673 323 aaKnown RBP17.31■□□□□ 0.36
SFXN1-208ENST00000507823 TLR1Q15399 786 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 GAB4Q2WGN9 574 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 SFT2D3Q587I9 215 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 LPCAT4Q643R3 524 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 IL27RAQ6UWB1 636 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 SLC15A3Q8IY34 581 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 FAM156AQ8NDB6 213 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 PROKR1Q8TCW9 393 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 LRRC58Q96CX6 371 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 ZSCAN5AQ9BUG6 496 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 TRIM54Q9BYV2 358 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 SLC29A3Q9BZD2 475 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 ASIC5Q9NY37 505 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 LAMA2P24043 3122 aaKnown RBP17.31■□□□□ 0.36
SFXN1-208ENST00000507823 NME4O00746 187 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 SYNCRIPO60506 623 aaKnown RBP17.31■□□□□ 0.36
SFXN1-208ENST00000507823 STK16O75716 305 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 SLC6A2P23975 617 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 UFM1P61960 85 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 ABRAXAS2Q15018 415 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 C12orf40Q86WS4 652 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 DCBLD1Q8N8Z6 715 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 SMG7Q92540 1137 aaKnown RBP17.31■□□□□ 0.36
SFXN1-208ENST00000507823 GATA6Q92908 595 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 ZUFSPQ96AP4 578 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 PPP3R2Q96LZ3 170 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 PARVBQ9HBI1 364 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 PCDHA9Q9Y5H5 950 aa17.31■□□□□ 0.36
SFXN1-208ENST00000507823 PSMD11O00231 422 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 EPORP19235 508 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 IL12AP29459 219 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 KCNK10P57789 538 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 ERVK-21P61565 698 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 TRIP10Q15642 601 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 GGTA1PQ4G0N0 100 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 TCEAL5Q5H9L2 206 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 LAYNQ6UX15 382 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 Q6ZVL8 140 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 LRRC70Q7Z2Q7 622 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 ZFAND4Q86XD8 727 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 NRSN1Q8IZ57 195 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 LILRA2Q8N149 483 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 DPP10Q8N608 796 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 FNDC5Q8NAU1 212 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 GOLM1Q8NBJ4 401 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 USP7Q93009 1102 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 LRCH3Q96II8 777 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 BTBD9Q96Q07 612 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 UHRF1Q96T88 793 aaPredicted RBP17.3■□□□□ 0.36
SFXN1-208ENST00000507823 ACTL8Q9H568 366 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 CD84Q9UIB8 345 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms