RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ASB5Q8WWX0 329 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 FOXD4L4Q8WXT5 416 aaPredicted RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 GPR137Q96N19 417 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 MCCC1Q96RQ3 725 aaPredicted RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 DMRTA2Q96SC8 542 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 VKORC1Q9BQB6 163 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 AP1M1Q9BXS5 423 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 SPRTNQ9H040 489 aaPredicted RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 TRIM39Q9HCM9 518 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 METTL5Q9NRN9 209 aaKnown RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 IRAK4Q9NWZ3 460 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 DTLQ9NZJ0 730 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 MTMR6Q9Y217 621 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 HS3ST3B1Q9Y662 390 aa6.97□□□□□ -1.29
VCAN-207ENST00000507162 CFAP20Q9Y6A4 193 aaKnown RBP6.97□□□□□ -1.29
VCAN-207ENST00000507162 HRNRQ86YZ3 2850 aaPredicted RBP6.96□□□□□ -1.29
VCAN-207ENST00000507162 GSAPA4D1B5 854 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 ADAM10O14672 748 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 MTX2O75431 263 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 OR2B3O76000 313 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 PRAMEF1O95521 474 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 MLYCDO95822 493 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 WDPCPO95876 746 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 RAF1P04049 648 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 VCLP18206 1134 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 GABRB2P47870 512 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 HSF1Q00613 529 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 ALDH6A1Q02252 535 aaKnown RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 RUNX1T1Q06455 604 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 TFF3Q07654 80 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 PRKAA1Q13131 559 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 CBLBQ13191 982 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 RFTN1Q14699 578 aaPredicted RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 MRPL14Q6P1L8 145 aaKnown RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 WASH2PQ6VEQ5 465 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 CCDC71Q8IV32 467 aaPredicted RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 OR4E2Q8NGC2 313 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 BRIX1Q8TDN6 353 aaKnown RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 THAP3Q8WTV1 239 aaPredicted RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 FAM172AQ8WUF8 416 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 SLC20A1Q8WUM9 679 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 ZFPM2Q8WW38 1151 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 CPA5Q8WXQ8 436 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 NACC2Q96BF6 587 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 VPS50Q96JG6 964 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 PSKH2Q96QS6 385 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 NUDCD1Q96RS6 583 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 WDR24Q96S15 920 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 CRACR2AQ9BSW2 395 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 SPATA16Q9BXB7 569 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 ZNF160Q9HCG1 818 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 RASSF1Q9NS23 344 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 TXLNGQ9NUQ3 528 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 IMP3Q9NV31 184 aaKnown RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 NOCTQ9UK39 431 aaKnown RBP6.96□□□□□ -1.3
VCAN-207ENST00000507162 ADGRG1Q9Y653 693 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 MPDZO75970 2070 aa6.96□□□□□ -1.3
VCAN-207ENST00000507162 HCFC1P51610 2035 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 CHUKO15111 745 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 FGF10O15520 208 aaPredicted RBP6.95□□□□□ -1.3
VCAN-207ENST00000507162 DAPK3O43293 454 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 ASNA1O43681 348 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 CRLF1O75462 422 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 WFS1O76024 890 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 USP1O94782 785 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 CDK14O94921 469 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 PVRP15151 417 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 ST6GAL1P15907 406 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 PFKFB1P16118 471 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 CHRNB4P30926 498 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 TPI1P60174 286 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 APBA1Q02410 837 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 ITKQ08881 620 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 XRCC4Q13426 336 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 SYCP1Q15431 976 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 TFDP3Q5H9I0 405 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 TAF3Q5VWG9 929 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 ALS2CLQ60I27 953 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 RHBDD2Q6NTF9 364 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 CDHR3Q6ZTQ4 885 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 ENOSF1Q7L5Y1 443 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 STRADAQ7RTN6 431 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 KBTBD2Q8IY47 623 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 CARFQ8N187 725 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 VWA5B2Q8N398 1253 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 PGBD5Q8N414 524 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.95□□□□□ -1.3
VCAN-207ENST00000507162 ZNF655Q8N720 491 aaPredicted RBP6.95□□□□□ -1.3
VCAN-207ENST00000507162 SIMC1Q8NDZ2 872 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 OR11G2Q8NGC1 345 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 JOSD2Q8TAC2 188 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 PROKR1Q8TCW9 393 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 MESP1Q9BRJ9 268 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 TIMM29Q9BSF4 260 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 NAA15Q9BXJ9 866 aaKnown RBP6.95□□□□□ -1.3
VCAN-207ENST00000507162 DEF6Q9H4E7 631 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 SOX17Q9H6I2 414 aaPredicted RBP6.95□□□□□ -1.3
VCAN-207ENST00000507162 PKD2L2Q9NZM6 624 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 TRPS1Q9UHF7 1281 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms