RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 SNX7Q9UNH6 387 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 PPIEQ9UNP9 301 aaKnown RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 DGKBQ9Y6T7 804 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 RNF103-CHMP3A0A140T963 221 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 CAPN8A6NHC0 703 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 TBX10O75333 385 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 WFS1O76024 890 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 IPO13O94829 963 aaKnown RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 LRATO95237 230 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 CLDN9O95484 217 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 EPOP01588 193 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 NTRK1P04629 796 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 GNAZP19086 355 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 ITPKBP27987 946 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 GRIA1P42261 906 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 SMYD5Q6GMV2 418 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 ASTLQ6HA08 431 aaPredicted RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 KIAA1211LQ6NV74 962 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 C16orf89Q6UX73 402 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 PIWIL4Q7Z3Z4 852 aaKnown RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 FAM160A2Q8N612 972 aaPredicted RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 METTL27Q8N6F8 245 aaPredicted RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 NAT6Q93015 286 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 NXNL1Q96CM4 212 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 PPP3R2Q96LZ3 170 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 AGAP2Q99490 1192 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 STOML1Q9UBI4 398 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 A0A0G2JN53 185 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 AP2A2O94973 939 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 C2P06681 752 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 CYLC2Q14093 348 aaPredicted RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 DPYSQ14117 519 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 TSNQ15631 228 aaKnown RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 GPAT3Q53EU6 434 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 DUPD1Q68J44 220 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 PMEPA1Q969W9 287 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 IMP4Q96G21 291 aaKnown RBP9.28□□□□□ -0.92
NEK1-203ENST00000507142 ACSS3Q9H6R3 686 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 IPPKQ9H8X2 491 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 VTI1BQ9UEU0 232 aa9.28□□□□□ -0.92
NEK1-203ENST00000507142 DRGXA6NNA5 263 aa9.27□□□□□ -0.92
NEK1-203ENST00000507142 H3BNH8 94 aa9.27□□□□□ -0.92
NEK1-203ENST00000507142 RRP8O43159 456 aaKnown RBP9.27□□□□□ -0.92
NEK1-203ENST00000507142 MDH1P40925 334 aaKnown RBP9.27□□□□□ -0.92
NEK1-203ENST00000507142 ZNF155Q12901 538 aaPredicted RBP9.27□□□□□ -0.92
NEK1-203ENST00000507142 R3HCC1LQ7Z5L2 792 aaKnown RBP9.27□□□□□ -0.92
NEK1-203ENST00000507142 SPRED2Q7Z698 418 aa9.27□□□□□ -0.92
NEK1-203ENST00000507142 CENPLQ8N0S6 344 aaPredicted RBP9.27□□□□□ -0.92
NEK1-203ENST00000507142 GBP7Q8N8V2 638 aaPredicted RBP9.27□□□□□ -0.92
NEK1-203ENST00000507142 PPCDCQ96CD2 204 aa9.27□□□□□ -0.92
NEK1-203ENST00000507142 EDEM2Q9BV94 578 aa9.27□□□□□ -0.92
NEK1-203ENST00000507142 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.27□□□□□ -0.92
NEK1-203ENST00000507142 PIF1Q9H611 641 aa9.27□□□□□ -0.92
NEK1-203ENST00000507142 ZNF490Q9ULM2 529 aaPredicted RBP9.27□□□□□ -0.92
NEK1-203ENST00000507142 MAPRE3Q9UPY8 281 aa9.27□□□□□ -0.92
NEK1-203ENST00000507142 NDUFS4O43181 175 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 GMFGO60234 142 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 OR6A2O95222 327 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 HEXBP07686 556 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 HNRNPLP14866 589 aaKnown RBP eCLIP9.27□□□□□ -0.93
NEK1-203ENST00000507142 PIK3R1P27986 724 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 PDK4Q16654 411 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 NADSYN1Q6IA69 706 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 NLRP14Q86W24 1093 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 ISG20Q96AZ6 181 aaKnown RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 PYCR2Q96C36 320 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 SH3GL1Q99961 368 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 C3orf14Q9HBI5 128 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 EQTNQ9NQ60 294 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 NLE1Q9NVX2 485 aaPredicted RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 CHCHD3Q9NX63 227 aaKnown RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 C19orf25Q9UFG5 118 aaPredicted RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 ATP6V1HQ9UI12 483 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 TEKT2Q9UIF3 430 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 CLCA3PQ9Y6N3 262 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 GRXCR2A6NFK2 248 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 C5orf67F2Z3F1 127 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 ERN1O75460 977 aaKnown RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 UMPSP11172 480 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 IRF4Q15306 451 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 HIBCHQ6NVY1 386 aaPredicted RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 CYP4Z1Q86W10 505 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 C1orf210Q8IVY1 113 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 ZDHHC14Q8IZN3 488 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 KCNV2Q8TDN2 545 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 RAD21L1Q9H4I0 556 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 CAAP1Q9H8G2 361 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 VIPAS39Q9H9C1 493 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 ANLNQ9NQW6 1124 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 PADI2Q9Y2J8 665 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 MYO5AQ9Y4I1 1855 aaKnown RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 TUBGCP6Q96RT7 1819 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 HOXC11O43248 304 aaPredicted RBP9.27□□□□□ -0.93
NEK1-203ENST00000507142 FAM155BO75949 473 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 CCND1P24385 295 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 PRKCHP24723 683 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 MAPK12P53778 367 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 PTPN5P54829 565 aa9.27□□□□□ -0.93
NEK1-203ENST00000507142 MANFP55145 182 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms