RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NEURL1O76050 574 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 MLYCDO95822 493 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TP53P04637 393 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SERPINA7P05543 415 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 THBS1P07996 1170 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CD63P08962 238 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 HBQ1P09105 142 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ATXN8OSP0DMR3 200 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ST6GAL1P15907 406 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SRD5A1P18405 259 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 FDXRP22570 491 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 IGFBP5P24593 272 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 BRD2P25440 801 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 RPL10P27635 214 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 LOXP28300 417 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 UQCRC1P31930 480 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 KRT9P35527 623 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CYLC1P35663 651 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 GPR1P46091 355 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 LMAN1P49257 510 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ARL4DP49703 201 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ST13P50502 369 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 EFNA3P52797 238 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CDK17Q00537 523 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 NME3Q13232 169 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TUBA3CQ13748 450 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ACKR1Q16570 336 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ATP13A4Q4VNC1 1196 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CMPK2Q5EBM0 449 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 BRMS1LQ5PSV4 323 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TMTC4Q5T4D3 741 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ABHD17BQ5VST6 288 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 VASNQ6EMK4 673 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 FBXO42Q6P3S6 717 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TUBA3EQ6PEY2 450 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SHISA6Q6ZSJ9 500 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SEM1Q6ZVN7 128 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 IL17RELQ6ZVW7 336 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 NEK10Q6ZWH5 1172 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 OVCH1Q7RTY7 1134 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 GALNTL5Q7Z4T8 443 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SLC13A5Q86YT5 568 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 PHYKPLQ8IUZ5 450 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF547Q8IVP9 402 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 RBM12BQ8IXT5 1001 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TTC30BQ8N4P2 665 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 DTWD1Q8N5C7 304 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 NAXEQ8NCW5 288 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SEMA6DQ8NFY4 1073 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 RASSF8Q8NHQ8 419 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ZFPM2Q8WW38 1151 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CASKIN2Q8WXE0 1202 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 FKBP10Q96AY3 582 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 INTS4Q96HW7 963 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SMIM14Q96QK8 99 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 MCCC1Q96RQ3 725 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 NPY6RQ99463 290 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CCL19Q99731 98 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 NRTNQ99748 197 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 LLPHQ9BRT6 129 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 TRIM62Q9BVG3 475 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 AP1M1Q9BXS5 423 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 MAGEB5Q9BZ81 275 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 IMPG2Q9BZV3 1241 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ZYG11BQ9C0D3 744 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SLC6A16Q9GZN6 736 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 MAGEH1Q9H213 219 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 MRM3Q9HC36 420 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SYTL2Q9HCH5 934 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 FAM60AQ9NP50 221 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 KLHL1Q9NR64 748 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 KLC4Q9NSK0 619 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 PNPLA3Q9NST1 481 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SOHLH2Q9NX45 425 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 DTLQ9NZJ0 730 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 ATXN10Q9UBB4 475 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 PPARGC1AQ9UBK2 798 aaKnown RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CTSFQ9UBX1 484 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 LPAR3Q9UBY5 353 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 GPN3Q9UHW5 284 aaPredicted RBP3.19□□□□□ -1.9
TCOF1-208ENST00000506063 CD84Q9UIB8 345 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 POMT2Q9UKY4 750 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 SMC3Q9UQE7 1217 aa3.19□□□□□ -1.9
TCOF1-208ENST00000506063 IGHV1-45A0A0A0MS14 117 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GOLGA6CA6NDK9 693 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GOLGA6BA6NDN3 693 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 DEFB108AA8MXU0 73 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 FAM72CH0Y354 149 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 PSMD11O00231 422 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 BUB1O43683 1085 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 VEGFDO43915 354 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 SRGAP2O75044 1071 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GRAP2O75791 330 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ALBP02768 609 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 SP1P08047 785 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 PAEPP09466 180 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GOLGA6DP0CG33 693 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms