RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 ZFP1Q6P2D0 407 aa20.52■□□□□ 0.88
TTC39B-204ENST00000505732 VRK3Q8IV63 474 aa20.52■□□□□ 0.88
TTC39B-204ENST00000505732 ETFBKMTQ8IXQ9 262 aa20.52■□□□□ 0.88
TTC39B-204ENST00000505732 ST13P5Q8NFI4 369 aaPredicted RBP20.52■□□□□ 0.88
TTC39B-204ENST00000505732 BPIFB1Q8TDL5 484 aa20.52■□□□□ 0.88
TTC39B-204ENST00000505732 SKA2Q8WVK7 121 aaPredicted RBP20.52■□□□□ 0.88
TTC39B-204ENST00000505732 NXPE3Q969Y0 559 aa20.52■□□□□ 0.88
TTC39B-204ENST00000505732 SPDL1Q96EA4 605 aa20.52■□□□□ 0.88
TTC39B-204ENST00000505732 EBF3Q9H4W6 596 aa20.52■□□□□ 0.88
TTC39B-204ENST00000505732 STK16O75716 305 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 SLC22A3O75751 556 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 ZFP36L2P47974 494 aaKnown RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 NRIP1P48552 1158 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 CLNS1AP54105 237 aaKnown RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 ERVK-21P61565 698 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 PDCD4Q53EL6 469 aaKnown RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 SAMD4BQ5PRF9 694 aaKnown RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 HENMT1Q5T8I9 393 aaKnown RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 METTL2BQ6P1Q9 378 aaKnown RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 UBE2R2Q712K3 238 aaPredicted RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 DPPA4Q7L190 304 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 SPATA24Q86W54 205 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 PQLC1Q8N2U9 271 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 TRAM1L1Q8N609 369 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 KIAA1958Q8N8K9 716 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 HCAR2Q8TDS4 363 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 TSPEARQ8WU66 669 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 HOPXQ9BPY8 73 aaPredicted RBP20.52■□□□□ 0.87
TTC39B-204ENST00000505732 ARL15Q9NXU5 204 aa20.52■□□□□ 0.87
TTC39B-204ENST00000505732 OTOL1A6NHN0 477 aaPredicted RBP20.51■□□□□ 0.87
TTC39B-204ENST00000505732 VGLL3A8MV65 326 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 FADS2P1A8MWK0 482 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 PRRT4C9JH25 899 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 CFAP99D6REC4 459 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 CASQ2O14958 399 aaPredicted RBP20.51■□□□□ 0.87
TTC39B-204ENST00000505732 NUAK1O60285 661 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 PEX2P28328 305 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 KCNK10P57789 538 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 BOP1Q14137 746 aaKnown RBP20.51■□□□□ 0.87
TTC39B-204ENST00000505732 TECPR1Q7Z6L1 1165 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 NPAS3Q8IXF0 933 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 CHCHD4Q8N4Q1 142 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 ASB11Q8WXH4 323 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 VPS33AQ96AX1 596 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 ASB16Q96NS5 453 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 NTMT1Q9BV86 223 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 SLC12A9Q9BXP2 914 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 C6orf203Q9P0P8 240 aaPredicted RBP20.51■□□□□ 0.87
TTC39B-204ENST00000505732 EPS15L1Q9UBC2 864 aa20.51■□□□□ 0.87
TTC39B-204ENST00000505732 A0A1W2PP18 115 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 LSM1O15116 133 aaKnown RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 SGTAO43765 313 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 EPB42P16452 691 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 PIK3CGP48736 1102 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 RCAN2Q14206 197 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 NR6A1Q15406 480 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 TRIP10Q15642 601 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 COQ5Q5HYK3 327 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 CDKL4Q5MAI5 379 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 PLEKHS1Q5SXH7 462 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 ZNF648Q5T619 568 aaPredicted RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 ANO7Q6IWH7 933 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 LIPIQ6XZB0 460 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 PARS2Q7L3T8 475 aaKnown RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 MINDY1Q8N5J2 469 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 SAMD11Q96NU1 681 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 ZSCAN5AQ9BUG6 496 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 KLHL4Q9C0H6 718 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 PARVBQ9HBI1 364 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 RAD18Q9NS91 495 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 GID8Q9NWU2 228 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 ZIM2Q9NZV7 527 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 RNF11Q9Y3C5 154 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 LOC730098B7Z3J9 87 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 FXYD1O00168 92 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 KPNA3O00505 521 aaPredicted RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 C8GP07360 202 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 ENO2P09104 434 aaPredicted RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 EBLN1P0CF75 366 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 MPC1LP0DKB6 136 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 MSH3P20585 1137 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 MMP12P39900 470 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 EMX2Q04743 252 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 TRAP1Q12931 704 aaKnown RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 GRIN2CQ14957 1233 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 ERAP2Q6P179 960 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 BEND7Q8N7W2 519 aaPredicted RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 DDHD1Q8NEL9 900 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 PROKR1Q8TCW9 393 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 FGF13Q92913 245 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 SMARCD2Q92925 531 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 LRRC58Q96CX6 371 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 VCX3BQ9H321 246 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 NFKBIL1Q9UBC1 381 aaPredicted RBP20.5■□□□□ 0.87
TTC39B-204ENST00000505732 ITM2BQ9Y287 266 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 CCL27Q9Y4X3 112 aa20.5■□□□□ 0.87
TTC39B-204ENST00000505732 FFAR3O14843 346 aa20.49■□□□□ 0.87
TTC39B-204ENST00000505732 KPNA5O15131 536 aa20.49■□□□□ 0.87
TTC39B-204ENST00000505732 GPR42O15529 346 aa20.49■□□□□ 0.87
TTC39B-204ENST00000505732 NFATC1O95644 943 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms