RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NAT16Q8N8M0 369 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 OR52B6Q8NGF0 335 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 SMARCD2Q92925 531 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 SPDL1Q96EA4 605 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 TMEM79Q9BSE2 394 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 KLHL4Q9C0H6 718 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 SLC32A1Q9H598 525 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 ASIC5Q9NY37 505 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 ADAMTS6Q9UKP5 1117 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 A0A1B0GTL3 188 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 EDDM13A0A1B0GTR0 161 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 E7ENX8 843 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 H3BNX3 289 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 SYNCRIPO60506 623 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 EEDO75530 441 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 C8BP07358 591 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 MMP12P39900 470 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 ARL1P40616 181 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 RPIAP49247 311 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 MRPS35P82673 323 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 RARS2Q5T160 578 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 IL27RAQ6UWB1 636 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 ZNF765Q7L2R6 523 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 ITFG1Q8TB96 612 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 CYB5D2Q8WUJ1 264 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 ASZ1Q8WWH4 475 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 ECSITQ9BQ95 431 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 EPHX3Q9H6B9 360 aa16.95■□□□□ 0.3
TRAPPC11-204ENST00000505676 C16orf96A6NNT2 1141 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 TULP3O75386 442 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 GSTM1P09488 218 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 GSTM4Q03013 218 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 PRKG2Q13237 762 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 PHKG1Q16816 387 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 UBE2R2Q712K3 238 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 TECPR1Q7Z6L1 1165 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 FNDC5Q8NAU1 212 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 BHLHE22Q8NFJ8 381 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 OR9I1Q8NGQ6 314 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ASB11Q8WXH4 323 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 OR8D1Q8WZ84 308 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 CCDC97Q96F63 343 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 PPP1R16AQ96I34 528 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ASB16Q96NS5 453 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 EFHD1Q9BUP0 239 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ASB1Q9Y576 335 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 PTGDR2Q9Y5Y4 395 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 PLXNB3Q9ULL4 1909 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 DNAJA2O60884 412 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 SORBS2O94875 1100 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 GUCA1CO95843 209 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 KRT6AP02538 564 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 KRT6BP04259 564 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 HSD17B1P14061 328 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ITGB7P26010 798 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 KRT6CP48668 564 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 RALGDSQ12967 914 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 TRIM46Q7Z4K8 759 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 HSD11B1LQ7Z5J1 315 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 APLFQ8IW19 511 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 MCOLN3Q8TDD5 553 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 BTN2A2Q8WVV5 523 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ZUFSPQ96AP4 578 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 NR1H4Q96RI1 486 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ZCCHC2Q9C0B9 1178 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 ARL15Q9NXU5 204 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 DEC1Q9P2X7 70 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 PLXNA2O75051 1894 aa16.94■□□□□ 0.3
TRAPPC11-204ENST00000505676 GFYI3L273 518 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 CA3P07451 260 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 ELFN1P0C7U0 828 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 CLNS1AP54105 237 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 KLC1Q07866 573 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 FBXO48Q5FWF7 155 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 IZUMO2Q6UXV1 221 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 Q6ZSR9 355 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 RASGRP3Q8IV61 690 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 GDPD5Q8WTR4 605 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 UCMAQ8WVF2 138 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 N4BP2L2Q92802 583 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 LRGUKQ96M69 825 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 BTBD9Q96Q07 612 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 SLC52A3Q9NQ40 469 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 EIF3LQ9Y262 564 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 SERTM1A2A2V5 107 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 CCDC154A6NI56 674 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 PER2O15055 1255 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 LSM1O15116 133 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 CLDN9O95484 217 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 CTSLP07711 333 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 CAPN3P20807 821 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 FSHRP23945 695 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 POLR2JP52435 117 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 RHDQ02161 417 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 CBX2Q14781 532 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 NR6A1Q15406 480 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 HNRNPA1L2Q32P51 320 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 OGFRL1Q5TC84 451 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 NLRP8Q86W28 1048 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms