RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 ZSCAN5DPP0CG00 497 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 FGF5P12034 268 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 LIFP15018 202 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.28
HOXC6-203ENST00000504315 SH3BP2P78314 561 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 ABHD18Q0P651 414 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 PLCL1Q15111 1095 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 FAM92BQ6ZTR7 304 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 NLRP9Q7RTR0 991 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 TAS2R42Q7RTR8 314 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 OOSP2Q86WS3 158 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 KMT5CQ86Y97 462 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 CLDN19Q8N6F1 224 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 ZSCAN1Q8NBB4 408 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 JPH3Q8WXH2 748 aaPredicted RBP13.33□□□□□ -0.28
HOXC6-203ENST00000504315 ZNF778Q96MU6 729 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 SLC2A6Q9UGQ3 507 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 COLEC10Q9Y6Z7 277 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 ZNF462Q96JM2 2506 aa13.33□□□□□ -0.28
HOXC6-203ENST00000504315 CCDC78A2IDD5 438 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 LIN7AO14910 233 aaPredicted RBP13.32□□□□□ -0.28
HOXC6-203ENST00000504315 RASSF9O75901 435 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 GOT2P00505 430 aaKnown RBP13.32□□□□□ -0.28
HOXC6-203ENST00000504315 POLBP06746 335 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 LMAN1P49257 510 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 SEPHS1P49903 392 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 LINC00303Q3SY05 128 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
HOXC6-203ENST00000504315 LYPLAL1Q5VWZ2 237 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 CYB5D1Q6P9G0 228 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 CERS6Q6ZMG9 384 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 ZNF534Q76KX8 674 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 RASGEF1CQ8N431 466 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 ZNF843Q8N446 348 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 PRELID2Q8N945 189 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 ACVR1CQ8NER5 493 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 HDAC10Q969S8 669 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.28
HOXC6-203ENST00000504315 SLC45A3Q96JT2 553 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 OR6C1Q96RD1 312 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 MAP3K3Q99759 626 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 SEMA4CQ9C0C4 833 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 MVB12BQ9H7P6 319 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 HOMER3Q9NSC5 361 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 HRASLS2Q9NWW9 162 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 SMARCAL1Q9NZC9 954 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 FAM8A1Q9UBU6 413 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 PRSS21Q9Y6M0 314 aa13.32□□□□□ -0.28
HOXC6-203ENST00000504315 MDC1Q14676 2089 aaKnown RBP13.32□□□□□ -0.28
HOXC6-203ENST00000504315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.31□□□□□ -0.28
HOXC6-203ENST00000504315 MATN2O00339 956 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 CEP104O60308 925 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 ZNF28P17035 718 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 TPSB2P20231 275 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 PDHA2P29803 388 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 CXCR5P32302 372 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 STAT5AP42229 794 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 KCNJ1P48048 391 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
HOXC6-203ENST00000504315 FOXM1Q08050 763 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 C19orf57Q0VDD7 668 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 BOP1Q14137 746 aaKnown RBP13.31□□□□□ -0.28
HOXC6-203ENST00000504315 GSE1Q14687 1217 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 TPSAB1Q15661 275 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 CRTC2Q53ET0 693 aaPredicted RBP13.31□□□□□ -0.28
HOXC6-203ENST00000504315 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
HOXC6-203ENST00000504315 BPHLQ86WA6 291 aaPredicted RBP13.31□□□□□ -0.28
HOXC6-203ENST00000504315 D2HGDHQ8N465 521 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 ESX1Q8N693 406 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 MED8Q96G25 268 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 FCRL4Q96PJ5 515 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 EFHD1Q9BUP0 239 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 TWSG1Q9GZX9 223 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 TFB2MQ9H5Q4 396 aaKnown RBP13.31□□□□□ -0.28
HOXC6-203ENST00000504315 TREX1Q9NSU2 369 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 POMT2Q9UKY4 750 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 BTRCQ9Y297 605 aa13.31□□□□□ -0.28
HOXC6-203ENST00000504315 LOC101059948A0A1B0GTJ6 334 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 SLC5A10A0PJK1 596 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 AP3B1O00203 1094 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 IFRD1O00458 451 aaPredicted RBP13.3□□□□□ -0.28
HOXC6-203ENST00000504315 ZBTB11O95625 1053 aaPredicted RBP13.3□□□□□ -0.28
HOXC6-203ENST00000504315 FTH1P02794 183 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 FOLR1P15328 257 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 ACADLP28330 430 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 MAGEA6P43360 314 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 PREPP48147 710 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 HSD11B2P80365 405 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 CDK16Q00536 496 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 PLOD1Q02809 727 aaPredicted RBP13.3□□□□□ -0.28
HOXC6-203ENST00000504315 LY6DQ14210 128 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 PCID2Q5JVF3 399 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 ARMC3Q5W041 872 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 PPP1R3BQ86XI6 285 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 PPHLN1Q8NEY8 458 aaKnown RBP13.3□□□□□ -0.28
HOXC6-203ENST00000504315 OR4L1Q8NH43 312 aa13.3□□□□□ -0.28
HOXC6-203ENST00000504315 TFGQ92734 400 aaPredicted RBP13.3□□□□□ -0.28
HOXC6-203ENST00000504315 ULBP3Q9BZM4 244 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms