RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 POU5F2Q8N7G0 328 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TTLL6Q8N841 843 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CPEB3Q8NE35 698 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SPPL3Q8TCT6 385 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MYLPFQ96A32 169 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF48Q96MX3 618 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ERMAPQ96PL5 475 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MAP3K3Q99759 626 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 EBNA1BP2Q99848 306 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 KCTD14Q9BQ13 255 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PYM1Q9BRP8 204 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 KCNH6Q9H252 994 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FAM96AQ9H5X1 160 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 USP29Q9HBJ7 922 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 YTHDC2Q9H6S0 1430 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 E9PCH4 1651 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FRMPD4Q14CM0 1322 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 GPR171O14626 319 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 BET1O15155 118 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 COCHO43405 550 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PAICSP22234 425 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PEX2P28328 305 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 IL15P40933 162 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 LIFRP42702 1097 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF200P98182 395 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TLE4Q04727 773 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 NPRL3Q12980 569 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MKRN4PQ13434 485 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TRADDQ15628 312 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CBWD6Q4V339 395 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CBWD3Q5JTY5 395 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 EFHC1Q5JVL4 640 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CBWD5Q5RIA9 395 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF836Q6ZNA1 936 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PIWIL3Q7Z3Z3 882 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ATCAYQ86WG3 371 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 OFCC1Q8IZS5 231 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 RNF148Q8N7C7 305 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PCYOX1LQ8NBM8 494 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 OR2W6PQ8NHA6 318 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DYNC2LI1Q8TCX1 351 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 LPGAT1Q92604 370 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ELP4Q96EB1 424 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TMA16Q96EY4 203 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CNOT6LQ96LI5 555 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PINK1Q9BXM7 581 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CIPCQ9C0C6 399 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ABCB8Q9NUT2 735 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SMPD4Q9NXE4 827 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 USP36Q9P275 1121 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 IGSF9Q9P2J2 1179 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 IRAK3Q9Y616 596 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 C20orf202A1L168 122 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 LINC00587B1AMM8 73 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 H0Y8G0 127 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PIK3R2O00459 728 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 GNGT2O14610 69 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SLC22A1O15245 554 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DCXO43602 365 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DEXIO95424 95 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 HRGP04196 525 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ADRB1P08588 477 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZSCAN5DPP0CG00 497 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TCF4P15884 667 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TGM1P22735 817 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CASP1P29466 404 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DUSP4Q13115 394 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CYP27C1Q4G0S4 372 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 C3orf38Q5JPI3 329 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 C18orf63Q68DL7 685 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRSS55Q6UWB4 352 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 BBS12Q6ZW61 710 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 USP30Q70CQ3 517 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DHDDSQ86SQ9 333 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MIER2Q8N344 545 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FAM13CQ8NE31 585 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF680Q8NEM1 530 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 NXNL1Q96CM4 212 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 LRIG1Q96JA1 1093 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FEM1CQ96JP0 617 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 HAPLN3Q96S86 360 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 RAD9AQ99638 391 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 EXO5Q9H790 373 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MTMR10Q9NXD2 777 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 KLHL8Q9P2G9 620 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 NKX1-2Q9UD57 310 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CCNL1Q9UK58 526 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ACSL6Q9UKU0 697 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CA14Q9ULX7 337 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF27A3QJZ7 478 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF25A6NGN4 478 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF26H0Y7S4 382 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF4O60810 478 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF11O60813 436 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 XYLBO75191 536 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SEC22BO75396 215 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SOX30O94993 753 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CH25HO95992 272 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CHRNA1P02708 482 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 IFNA6P05013 189 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms