RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 GAS8O95995 478 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 MT-ND3P03897 115 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 EBLN1P0CF75 366 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 POLR2CP19387 275 aaPredicted RBP21.5■■□□□ 1.03
LSM6-203ENST00000503982 OAS2P29728 719 aaKnown RBP21.5■■□□□ 1.03
LSM6-203ENST00000503982 CDKN1CP49918 316 aaPredicted RBP21.5■■□□□ 1.03
LSM6-203ENST00000503982 GDF10P55107 478 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.5■■□□□ 1.03
LSM6-203ENST00000503982 TMTC4Q5T4D3 741 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 ATG14Q6ZNE5 492 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 PTRH1Q86Y79 214 aaKnown RBP21.5■■□□□ 1.03
LSM6-203ENST00000503982 OR4E2Q8NGC2 313 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 STYXQ8WUJ0 223 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 HES6Q96HZ4 224 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 LINC00615Q96LM1 132 aaPredicted RBP21.5■■□□□ 1.03
LSM6-203ENST00000503982 KIR3DX1Q9H7L2 352 aa21.5■■□□□ 1.03
LSM6-203ENST00000503982 NLE1Q9NVX2 485 aaPredicted RBP21.5■■□□□ 1.03
LSM6-203ENST00000503982 TCRBV7S2A1N4TA0A589 114 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 ZSCAN12O43309 604 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 PRSS56P0CW18 603 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 FOLR1P15328 257 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 ITGB6P18564 788 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 CDH3P22223 829 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 ACRV1P26436 265 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 MSLNQ13421 630 aaPredicted RBP21.49■■□□□ 1.03
LSM6-203ENST00000503982 ERV3-1Q14264 604 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 PPP1R21Q6ZMI0 780 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 MICALCLQ6ZW33 695 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 KMT5CQ86Y97 462 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 TRIM58Q8NG06 486 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 ZFPM2Q8WW38 1151 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 ATG4AQ8WYN0 398 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 SLC41A2Q96JW4 573 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 COG4Q9H9E3 785 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 SMARCAL1Q9NZC9 954 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 KCND3Q9UK17 655 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 PADI1Q9ULC6 663 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 GUCA1BQ9UMX6 200 aa21.49■■□□□ 1.03
LSM6-203ENST00000503982 E7EVH7 732 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 SGTAO43765 313 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 AP2A1O95782 977 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 IFNB1P01574 187 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 HSD11B2P80365 405 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 CACNG1Q06432 222 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 KLF1Q13351 362 aaPredicted RBP21.48■■□□□ 1.03
LSM6-203ENST00000503982 KCTD11Q693B1 232 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 FBXO38Q6PIJ6 1188 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 CERS6Q6ZMG9 384 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 LINC00523Q86TU6 105 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 APOBEC4Q8WW27 367 aaKnown RBP21.48■■□□□ 1.03
LSM6-203ENST00000503982 LCN9Q8WX39 176 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 SRMSQ9H3Y6 488 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 FGF21Q9NSA1 209 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 ZNF148Q9UQR1 794 aa21.48■■□□□ 1.03
LSM6-203ENST00000503982 C17orf113A0A1B0GUU1 675 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 CDC14CA4D256 554 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 AGAP14A8MT82 685 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 ZBTB11O95625 1053 aaPredicted RBP21.47■■□□□ 1.03
LSM6-203ENST00000503982 NTRK1P04629 796 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 F8A1P23610 371 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 DNASE1L3Q13609 305 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 CCDC38Q502W7 563 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 CAPRIN2Q6IMN6 1127 aaKnown RBP21.47■■□□□ 1.03
LSM6-203ENST00000503982 PWWP2BQ6NUJ5 590 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 TMEM126BQ8IUX1 230 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 REXO1L1PQ8IX06 675 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 ACVR1CQ8NER5 493 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 OR52K1Q8NGK4 314 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 SLC35B2Q8TB61 432 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.47■■□□□ 1.03
LSM6-203ENST00000503982 CDKN2AIPNLQ96HQ2 116 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 C19orf43Q9BQ61 176 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 TWSG1Q9GZX9 223 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 FANCEQ9HB96 536 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 LZTFL1Q9NQ48 299 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 ZNF71Q9NQZ8 489 aaPredicted RBP21.47■■□□□ 1.03
LSM6-203ENST00000503982 KCND1Q9NSA2 647 aa21.47■■□□□ 1.03
LSM6-203ENST00000503982 MAP3K7O43318 606 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 TIAF1O95411 115 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 MSNP26038 577 aaKnown RBP21.46■■□□□ 1.03
LSM6-203ENST00000503982 PREPP48147 710 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 KPNA2P52292 529 aaKnown RBP21.46■■□□□ 1.03
LSM6-203ENST00000503982 KCNC4Q03721 635 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 BRD3Q15059 726 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 GPR19Q15760 415 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 SKIDA1Q1XH10 827 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 BPHLQ86WA6 291 aaPredicted RBP21.46■■□□□ 1.03
LSM6-203ENST00000503982 KLHDC8BQ8IXV7 354 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 PHC3Q8NDX5 983 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 C9orf43Q8TAL5 461 aaPredicted RBP21.46■■□□□ 1.03
LSM6-203ENST00000503982 CT55Q8WUE5 264 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 CLMPQ9H6B4 373 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 LHX9Q9NQ69 397 aa21.46■■□□□ 1.03
LSM6-203ENST00000503982 PIPSLA2A3N6 862 aa21.45■■□□□ 1.02
LSM6-203ENST00000503982 H7C0S8 307 aa21.45■■□□□ 1.02
LSM6-203ENST00000503982 SCRG1O75711 98 aa21.45■■□□□ 1.02
LSM6-203ENST00000503982 WISP1O95388 367 aa21.45■■□□□ 1.02
LSM6-203ENST00000503982 STIP1P31948 543 aaKnown RBP21.45■■□□□ 1.02
LSM6-203ENST00000503982 FDFT1P37268 417 aa21.45■■□□□ 1.02
LSM6-203ENST00000503982 CDH17Q12864 832 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms