RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CDH24Q86UP0 819 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 ZNF295-AS1Q8N0V1 137 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 BEND7Q8N7W2 519 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 OR4E2Q8NGC2 313 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 CCDC120Q96HB5 630 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 TSGA13Q96PP4 275 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 INSM2Q96T92 566 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 WWP1Q9H0M0 922 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 SCINQ9Y6U3 715 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 NAV3Q8IVL0 2385 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 TRGV8A0A0C4DH27 118 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 GSAPA4D1B5 854 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 CCL21O00585 134 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 PRICKLE3O43900 615 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 CBSLP0DN79 551 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 TCF4P15884 667 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 ST6GAL1P15907 406 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 CBSP35520 551 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 LMAN1P49257 510 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 KRT33BQ14525 404 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 KRT31Q15323 416 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 ASIC2Q16515 512 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 PRAMEF13Q5VWM6 474 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 METRNLQ641Q3 311 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 RPUSD3Q6P087 351 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 RASGEF1AQ8N9B8 481 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 N4BP2L2Q92802 583 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 MRPL47Q9HD33 250 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 AP1M2Q9Y6Q5 423 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 COLEC10Q9Y6Z7 277 aa15.33■□□□□ 0.04
PDLIM7-210ENST00000503827 PCDH17O14917 1159 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 NDUFS1P28331 727 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 PBLDP30039 288 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 PRDX3P30048 256 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 DCDP81605 110 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 MMRN1Q13201 1228 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 PAFAH1B3Q15102 231 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 C1orf189Q5VU69 101 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 NCBP2-AS2Q69YL0 99 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 TXNRD3NBQ6F5E7 133 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 TMEM220Q6QAJ8 160 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 NACC2Q96BF6 587 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 SRPK1Q96SB4 655 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 AP1M1Q9BXS5 423 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 ACSL5Q9ULC5 683 aa15.32■□□□□ 0.04
PDLIM7-210ENST00000503827 CCDC78A2IDD5 438 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 OR2AG2A6NM03 316 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 KCNN4O15554 427 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 SLC35G4P0C7Q5 338 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 CTSCP53634 463 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 GSE1Q14687 1217 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 LDLRAP1Q5SW96 308 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 ZFYVE27Q5T4F4 411 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 RHBDD2Q6NTF9 364 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 XKRXQ6PP77 449 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 GFRALQ6UXV0 394 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 PROKR1Q8TCW9 393 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 CPLX3Q8WVH0 158 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 MAGEB10Q96LZ2 347 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 TRIB3Q96RU7 358 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 PITPNM3Q9BZ71 974 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 SRMSQ9H3Y6 488 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 BPIFA1Q9NP55 256 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 SLC6A20Q9NP91 592 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 MYO1AQ9UBC5 1043 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 FBXL4Q9UKA2 621 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 CDYLQ9Y232 598 aa15.31■□□□□ 0.04
PDLIM7-210ENST00000503827 OR2B3O76000 313 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 FTLP02792 175 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 UMODP07911 640 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 CD1EP15812 388 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 MX2P20592 715 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 TDGF1P3P51864 188 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 KRTAP10-9P60411 292 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 PIGHQ14442 188 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 SLC9A5Q14940 896 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 CCDC183Q5T5S1 534 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 ZNF324BQ6AW86 544 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 CCDC70Q6NSX1 233 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 MRPL14Q6P1L8 145 aaKnown RBP15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 TMEM207Q6UWW9 146 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 CDHR3Q6ZTQ4 885 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 CCNYQ8ND76 341 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 ACVR1CQ8NER5 493 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 SPDYE1Q8NFV5 336 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 LRRN4Q8WUT4 740 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 LCN9Q8WX39 176 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 NR4A3Q92570 626 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 SYT11Q9BT88 431 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 LHPPQ9H008 270 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 KLHL25Q9H0H3 589 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 CLSTN2Q9H4D0 955 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 HEBP2Q9Y5Z4 205 aa15.3■□□□□ 0.04
PDLIM7-210ENST00000503827 MGAT4DA6NG13 374 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 CNOT3O75175 753 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 ALOX12BO75342 701 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms