RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CHST8Q9H2A9 424 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 OR52A5Q9H2C5 316 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 DEF6Q9H4E7 631 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 MVB12BQ9H7P6 319 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 VPS37BQ9H9H4 285 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 AKIRIN1Q9H9L7 192 aaPredicted RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 BPIFA1Q9NP55 256 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ARFGAP3Q9NP61 516 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ABHD10Q9NUJ1 306 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PLEKHB1Q9UF11 243 aaPredicted RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SERTAD3Q9UJW9 196 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PADI2Q9Y2J8 665 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 AP1M2Q9Y6Q5 423 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SPTBN1Q01082 2364 aaKnown RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 HIVEP3Q5T1R4 2406 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 hCG_1818297A0A087WSY0 165 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 OR2AG2A6NM03 316 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 CFAP99D6REC4 459 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 H3BMH7 237 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 UGT1A9O60656 530 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 KLF7O75840 302 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 DNAJB5O75953 348 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 IPO13O94829 963 aaKnown RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 AP2A2O94973 939 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 AGFG2O95081 481 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 KRT1P04264 644 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 ATP1B2P14415 290 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 UGT1A6P19224 532 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 NR1D1P20393 614 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 PTMSP20962 102 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 AGXTP21549 392 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 COMTP21964 271 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 UGT1A1P22309 533 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 UGT1A4P22310 534 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 PRDX3P30048 256 aaKnown RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 GEMP55040 296 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 PLOD1Q02809 727 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 KCNAB1Q14722 419 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 NCF4Q15080 339 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 INPP5JQ15735 1006 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 NADK2Q4G0N4 442 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 FNBP1LQ5T0N5 605 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 RHBDD2Q6NTF9 364 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 C11orf63Q6NUN7 778 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 CAVIN1Q6NZI2 390 aaKnown RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 FAM199XQ6PEV8 388 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 SARM1Q6SZW1 724 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 FAM198BQ6UWH4 519 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 NPNTQ6UXI9 565 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 FAM151BQ6UXP7 276 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 SPOCD1Q6ZMY3 1216 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 BBS12Q6ZW61 710 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 PID1Q7Z2X4 250 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 TMEM135Q86UB9 458 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 RAB43Q86YS6 212 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 CNGA4Q8IV77 575 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 SYTL1Q8IYJ3 562 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 NXPE1Q8N323 547 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 ENDOVQ8N8Q3 282 aaKnown RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 Q8NA96 180 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 BLOC1S5Q8TDH9 187 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 DENND1AQ8TEH3 1009 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 LRRN4Q8WUT4 740 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 MR1Q95460 341 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 RNF25Q96BH1 459 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 LRRC45Q96CN5 670 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 ELMO2Q96JJ3 720 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 FER1L6-AS2Q96M78 137 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 CCDC42Q96M95 316 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 C12orf66Q96MD2 445 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 FSD1LQ9BXM9 530 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 CEP41Q9BYV8 373 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 WWP1Q9H0M0 922 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 ASB8Q9H765 288 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 ACTR5Q9H9F9 607 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 NHEJ1Q9H9Q4 299 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 UGT1A7Q9HAW7 530 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 UGT1A10Q9HAW8 530 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 UGT1A8Q9HAW9 530 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 IMP3Q9NV31 184 aaKnown RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 PCMTD2Q9NV79 361 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 GPR83Q9NYM4 423 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 IFNKQ9P0W0 207 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 KLHL8Q9P2G9 620 aaPredicted RBP5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 SNX7Q9UNH6 387 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 SPTBP11277 2137 aa5.93□□□□□ -1.46
LSM3P4-201ENST00000502948 CCDC88CQ9P219 2028 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PCSK5Q92824 1860 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SYCE3A1L190 88 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 OR6C74A6NCV1 312 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ARGFXA6NJG6 315 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 C2orf74A8MZ97 194 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 TCP11X1B4DZS4 312 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 C9J4A7 227 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 E7EQ34 232 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 IFRD1O00458 451 aaPredicted RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 LIN7AO14910 233 aaPredicted RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SPOPO43791 374 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms