RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 DNAJC16Q9Y2G8 782 aa10.49□□□□□ -0.73
UBE2D3-212ENST00000502563 PCDHGA8Q9Y5G5 932 aa10.49□□□□□ -0.73
UBE2D3-212ENST00000502563 PRSS21Q9Y6M0 314 aa10.49□□□□□ -0.73
UBE2D3-212ENST00000502563 MN1Q10571 1320 aaPredicted RBP10.49□□□□□ -0.73
UBE2D3-212ENST00000502563 UBA6A0AVT1 1052 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 MATN2O00339 956 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 HYAL3O43820 417 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 KDM1AO60341 852 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 SNX2O60749 519 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 C9P02748 559 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 RPN2P04844 631 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 RPLP0P05388 317 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 APOA4P06727 396 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 ANKRD34CP0C6C1 535 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 PKMP14618 531 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 JUPP14923 745 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 RPL10P27635 214 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 CD1CP29017 333 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 SLC1A2P43004 574 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 PDIA2Q13087 525 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 BIRC2Q13490 618 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 CUL1Q13616 776 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 TMED2Q15363 201 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 PLA2G4EQ3MJ16 856 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 PTRHD1Q6GMV3 140 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 LRRC8EQ6NSJ5 796 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 TMEM71Q6P5X7 295 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 CES3Q6UWW8 571 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 ZDHHC24Q6UX98 284 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 UNC5DQ6UXZ4 953 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 NEK10Q6ZWH5 1172 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 PIM3Q86V86 326 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 IGDCC3Q8IVU1 814 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 SFTPA2Q8IWL1 248 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 TRIM48Q8IWZ4 208 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 CFAP206Q8IYR0 622 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 TBC1D21Q8IYX1 336 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 LSMEM2Q8N112 164 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 PHC3Q8NDX5 983 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 GATA6Q92908 595 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 CXorf40BQ96DE9 158 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 INSM2Q96T92 566 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 TRIM31Q9BZY9 425 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 TFB2MQ9H5Q4 396 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 C20orf96Q9NUD7 363 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 ZDHHC18Q9NUE0 388 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 KCNK4Q9NYG8 393 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 POLG2Q9UHN1 485 aa10.48□□□□□ -0.73
UBE2D3-212ENST00000502563 OR52A4PA6NMU1 304 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CBSLP0DN79 551 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 THRAP10827 490 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 MYF5P13349 255 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 ENO3P13929 434 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CCR7P32248 378 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CBSP35520 551 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 SKIV2L2P42285 1042 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CAPZBP47756 277 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 LIMK2P53671 638 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 TERF1P54274 439 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 PLTPP55058 493 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CCL7P80098 99 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 GUCY2DQ02846 1103 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 TARDBPQ13148 414 aaKnown RBP eCLIP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 NAB1Q13506 487 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 BOP1Q14137 746 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 GPR18Q14330 331 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 TCEA2Q15560 299 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 HSP90AA5PQ58FG0 334 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CTSL3PQ5NE16 218 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 TEDDM1Q5T9Z0 273 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 OTOAQ7RTW8 1153 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 PLXDC1Q8IUK5 500 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 ZBED8Q8IZ13 594 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 NOA1Q8NC60 698 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 FBXO15Q8NCQ5 510 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 FBXO36Q8NEA4 188 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 ACVR1CQ8NER5 493 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 OR5K2Q8NHB8 316 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 PYROXD1Q8WU10 500 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 ELMO1Q92556 727 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 TFGQ92734 400 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 NXPE2Q96DL1 559 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 RMDN2Q96LZ7 410 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 C12orf66Q96MD2 445 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CD180Q99467 661 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 TRIM56Q9BRZ2 755 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 MCMBPQ9BTE3 642 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 FUT8Q9BYC5 575 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 STRADBQ9C0K7 418 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 WWP1Q9H0M0 922 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 DPH5Q9H2P9 285 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 MTRF1LQ9UGC7 380 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CHMP2BQ9UQN3 213 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 MED16Q9Y2X0 877 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 ENTPD2Q9Y5L3 495 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 UNC13CQ8NB66 2214 aa10.47□□□□□ -0.73
UBE2D3-212ENST00000502563 CCDC187A0A096LP49 1063 aa10.46□□□□□ -0.73
UBE2D3-212ENST00000502563 GOLGA8KD6RF30 607 aa10.46□□□□□ -0.73
UBE2D3-212ENST00000502563 GOLGA8TH3BQL2 631 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms