RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SIRPB2Q5JXA9 342 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 RNASEH2BQ5TBB1 312 aaKnown RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 C6orf163Q5TEZ5 329 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 RUSC1-AS1Q66K80 236 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 ZNF595Q8IYB9 648 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 METTL27Q8N6F8 245 aaPredicted RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 L3MBTL4Q8NA19 623 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 TEKT4Q8WW24 435 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 NXNL1Q96CM4 212 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 MTERF3Q96E29 417 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 ARSGQ96EG1 525 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 CNDP2Q96KP4 475 aaKnown RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 ABHD6Q9BV23 337 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 OR10A4Q9H209 315 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 DPAGT1Q9H3H5 408 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 RABEP2Q9H5N1 569 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 OPA3Q9H6K4 179 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 CCDC177Q9NQR7 707 aaPredicted RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 DONSONQ9NYP3 566 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 C5AR2Q9P296 337 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 CFDP1Q9UEE9 299 aaPredicted RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 IL17BQ9UHF5 180 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS36-206ENST00000497149 RPS6KL1Q9Y6S9 549 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 A0A1W2PPI3 338 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 EME2A4GXA9 379 aaPredicted RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 TCERG1O14776 1098 aaKnown RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 TADA2AO75478 443 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 H1F0P07305 194 aaKnown RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 LINGO3P0C6S8 592 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 DANCRP0C864 163 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 MYBL1P10243 752 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 CETPP11597 493 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 AMD1P17707 334 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 CBLP22681 906 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 CPT2P23786 658 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 EEF1DP29692 281 aaKnown RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 MBTD1Q05BQ5 628 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 KIR2DS3Q14952 304 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 ZNF672Q499Z4 452 aaPredicted RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 ASPRV1Q53RT3 343 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 ZNF628Q5EBL2 1059 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 TCP11X2Q5H9J9 407 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 GRTP1Q5TC63 336 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 ZBTB8BQ8NAP8 495 aaPredicted RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 C17orf77Q96MU5 243 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 BAG1Q99933 345 aaPredicted RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 FNDC11Q9BVV2 318 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 WNT5BQ9H1J7 359 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 NOL11Q9H8H0 719 aaKnown RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 ANKZF1Q9H8Y5 726 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 PRMT7Q9NVM4 692 aaPredicted RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 OSER1Q9NX31 292 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 OSGIN1Q9UJX0 560 aa4.52□□□□□ -1.69
VPS36-206ENST00000497149 SPIN1Q9Y657 262 aaPredicted RBP4.52□□□□□ -1.69
VPS36-206ENST00000497149 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 EDDM13A0A1B0GTR0 161 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 MED19A0JLT2 244 aaPredicted RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 FEZF1A0PJY2 475 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 A8MXE2 369 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 SPRY1O43609 319 aaPredicted RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 KRT36O76013 467 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 ATP1A1P05023 1023 aaKnown RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 OR2T7P0C7T2 308 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 CKMT2P17540 419 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 DVL1P1P54792 670 aaPredicted RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 CSE1LP55060 971 aaKnown RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 ARL16Q0P5N6 197 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 ZNF718Q3SXZ3 478 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 KRT80Q6KB66 452 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 FAM198BQ6UWH4 519 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 DGLUCYQ7Z3D6 616 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 NFE4Q86UQ8 179 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 GPALPP1Q8IXQ4 340 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 CRYBG2Q8N1P7 616 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 DMBX1Q8NFW5 382 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 SCRN2Q96FV2 425 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 RADILQ96JH8 1075 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 LINC00615Q96LM1 132 aaPredicted RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 ZNF583Q96ND8 569 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 LMF2Q9BU23 707 aaKnown RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 TRMT61BQ9BVS5 477 aaKnown RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 TBC1D17Q9HA65 648 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 APOBEC3GQ9HC16 384 aaKnown RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 ACKR4Q9NPB9 350 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 PIH1D3Q9NQM4 214 aaKnown RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 SLC38A7Q9NVC3 462 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 GIMAP2Q9UG22 337 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 KCNG2Q9UJ96 466 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 FAF1Q9UNN5 650 aaPredicted RBP4.51□□□□□ -1.69
VPS36-206ENST00000497149 GRIP1Q9Y3R0 1128 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 CCL27Q9Y4X3 112 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 NME7Q9Y5B8 376 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 DOCK7Q96N67 2140 aa4.51□□□□□ -1.69
VPS36-206ENST00000497149 TMEM221A6NGB7 291 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 URADA6NGE7 173 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 PRR32B1ATL7 298 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 XPNPEP2O43895 674 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 OR10H2O60403 315 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 SYNCRIPO60506 623 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms