RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 EBLN1P0CF75 366 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CTSAP10619 480 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CHRM1P11229 460 aaPredicted RBP10.88□□□□□ -0.67
CMSS1-208ENST00000496116 EPB42P16452 691 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CKMT2P17540 419 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 JAK1P23458 1154 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CA5AP35218 305 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ROR2Q01974 943 aaKnown RBP10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CREB5Q02930 508 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 GK3PQ14409 553 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 PHKG1Q16816 387 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 MYLK3Q32MK0 819 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 LRRC66Q68CR7 880 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 C22orf39Q6P5X5 142 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CRTC1Q6UUV9 634 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 TSPAN33Q86UF1 283 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CARM1Q86X55 608 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ZSWIM9Q86XI8 627 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ADGRG5Q8IZF4 528 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 GPR26Q8NDV2 337 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 TRPV3Q8NET8 790 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
CMSS1-208ENST00000496116 NAT14Q8WUY8 206 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ULK4Q96C45 1275 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 CENPNQ96H22 339 aaPredicted RBP10.88□□□□□ -0.67
CMSS1-208ENST00000496116 HBEGFQ99075 208 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ZBTB18Q99592 522 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 COPS8Q99627 209 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 NTMT1Q9BV86 223 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ZBP1Q9H171 429 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ASAH2Q9NR71 780 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 ELOVL2Q9NXB9 296 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 KLHL42Q9P2K6 505 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 TRPS1Q9UHF7 1281 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 PCDHGB4Q9UN71 923 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 PPIL1Q9Y3C6 166 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 POLR3HQ9Y535 204 aaPredicted RBP10.88□□□□□ -0.67
CMSS1-208ENST00000496116 PCDHGB5Q9Y5G0 923 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 AK5Q9Y6K8 562 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 COMMD3-BMI1R4GMX3 469 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 PIKFYVEQ9Y2I7 2098 aa10.88□□□□□ -0.67
CMSS1-208ENST00000496116 A0A1W2PQ67 120 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 EIF3FO00303 357 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 FGF18O76093 207 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 OR56A5P0C7T3 313 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 MTHFD1P11586 935 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 SLC2A4P14672 509 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 WDR5P61964 334 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 YBX1P67809 324 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 RFTN2Q52LD8 501 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 CDKL4Q5MAI5 379 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 THEMIS2Q5TEJ8 643 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 TTC23LQ6PF05 361 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 SLC2A7Q6PXP3 512 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 GALNT13Q8IUC8 556 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 CMTM8Q8IZV2 173 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ECHDC3Q96DC8 303 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 DGCR14Q96DF8 476 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 HAUS8Q9BT25 410 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 EMILIN2Q9BXX0 1053 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ANKRD60Q9BZ19 345 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 CPEB1Q9BZB8 566 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 TRIM8Q9BZR9 551 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 CEP44Q9C0F1 390 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 VCX3AQ9NNX9 186 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 PNPLA3Q9NST1 481 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 INTS7Q9NVH2 962 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 SLAMF8Q9P0V8 285 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 MAGEL2Q9UJ55 1249 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ANAPC2Q9UJX6 822 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 RNF103-CHMP3A0A140T963 221 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 PABPN1LA6NDY0 278 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 SAC3D1A6NKF1 404 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 SOCS2O14508 198 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 TPST1O60507 370 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 STK16O75716 305 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 POP4O95707 220 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 TFAP2AP05549 437 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ADH1AP07327 375 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ATP6V1B1P15313 513 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 HLA-FP30511 346 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 OXTRP30559 389 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 GDF5P43026 501 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 CTSOP43234 321 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 STK19P49842 368 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 RPL38P63173 70 aaKnown RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 PLOD1Q02809 727 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ARHGEF7Q14155 803 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 IMPG1Q17R60 797 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 NHSL2Q5HYW2 709 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 TMTC4Q5T4D3 741 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 CACHD1Q5VU97 1274 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 NAIF1Q69YI7 327 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 AADATQ8N5Z0 425 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 MFSD2AQ8NA29 543 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 GLB1L3Q8NCI6 653 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 NCSTNQ92542 709 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ZNF641Q96N77 438 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms