RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 NEK10Q6ZWH5 1172 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 DPPA4Q7L190 304 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 LRRC70Q7Z2Q7 622 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 MILR1Q7Z6M3 343 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 KIAA0907Q7Z7F0 614 aaPredicted RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 ADGRG6Q86SQ4 1221 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 GALNT13Q8IUC8 556 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 PHYKPLQ8IUZ5 450 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 NRSN1Q8IZ57 195 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 DSELQ8IZU8 1212 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SLC26A7Q8TE54 656 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 UBTD2Q8WUN7 234 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 ATL1Q8WXF7 558 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 HPS1Q92902 700 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CCDC124Q96CT7 223 aaKnown RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 LMLNQ96KR4 655 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 MARK4Q96L34 752 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 PPP3R2Q96LZ3 170 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 LRGUKQ96M69 825 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 ZBTB18Q99592 522 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 HOPXQ9BPY8 73 aaPredicted RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 MUC13Q9H3R2 512 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 FAM83DQ9H4H8 585 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 ZNF385DQ9H6B1 395 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SPAG4Q9NPE6 437 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 IL26Q9NPH9 171 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 ADA2Q9NZK5 511 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CCDC167Q9P0B6 97 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 DEC1Q9P2X7 70 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SUCOQ9UBS9 1254 aaKnown RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 EIF2B4Q9UI10 523 aaKnown RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 MSRAQ9UJ68 235 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CROTQ9UKG9 612 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 L3MBTL1Q9Y468 752 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 MTF2Q9Y483 593 aaPredicted RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 A0A088AWK7 358 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 AGAP14A8MT82 685 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 H0Y858 1186 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 K7EPI3 171 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 NR5A2O00482 541 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 KPNA3O00505 521 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 NRP2O60462 931 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ATG13O75143 517 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 MOSPD3O75425 235 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 LEFTY1O75610 366 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 KRT36O76013 467 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 MATN4O95460 622 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 BAG2O95816 211 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 KRT6AP02538 564 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 KRT6BP04259 564 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 CA3P07451 260 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 C1SP09871 688 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 EBLN1P0CF75 366 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 MTHFD2P13995 350 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ATP1B2P14415 290 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 ANPEPP15144 967 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 EPB42P16452 691 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 SYN1P17600 705 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ITGB6P18564 788 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 TSPAN8P19075 237 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 MAPK1P28482 360 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 GKP32189 559 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 GCKP35557 465 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 IRS1P35568 1242 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 PTDSS1P48651 473 aaKnown RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 KRT6CP48668 564 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 MRPL19P49406 292 aaKnown RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 AP1S2P56377 157 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ERVK-21P61565 698 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 NTHL1P78549 312 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 TIAL1Q01085 375 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP39-219ENST00000496047 FOXK2Q01167 660 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 KCNC3Q14003 757 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 BOP1Q14137 746 aaKnown RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 ACOX1Q15067 660 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 CDKN3Q16667 212 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 DUSP6Q16828 381 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 SLC5A9Q2M3M2 681 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 KHDC1Q4VXA5 237 aaKnown RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 SETMARQ53H47 684 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 RARS2Q5T160 578 aaKnown RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 TMEM164Q5U3C3 297 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 CACHD1Q5VU97 1274 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 FAM109BQ6ICB4 259 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 FBXL19Q6PCT2 694 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 IL27RAQ6UWB1 636 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 PRR23BQ6ZRT6 265 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 GK5Q6ZS86 529 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 RNF165Q6ZSG1 346 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 UBE2R2Q712K3 238 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 LARP4Q71RC2 724 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP39-219ENST00000496047 GET4Q7L5D6 327 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 GOLGA7Q7Z5G4 137 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 RBM23Q86U06 439 aaKnown RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 TSPAN33Q86UF1 283 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ADIPOR2Q86V24 386 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 MYLK4Q86YV6 388 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 TMEM126BQ8IUX1 230 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ADGRG2Q8IZP9 1017 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 NAT16Q8N8M0 369 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms