RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 LZTFL1Q9NQ48 299 aa23.63■■□□□ 1.37
HLA-C-209ENST00000495835 IGHV5-51A0A0C4DH38 117 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 F8W8V4 182 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 AP3B1O00203 1094 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 MT-ND3P03897 115 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 SH3BP2P78314 561 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 ACY1Q03154 408 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 ZNF605Q86T29 641 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 PPP1R3BQ86XI6 285 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 PIANPQ8IYJ0 282 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 SIDT2Q8NBJ9 832 aaKnown RBP23.62■■□□□ 1.37
HLA-C-209ENST00000495835 ULBP3Q9BZM4 244 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 MVB12BQ9H7P6 319 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 CASS4Q9NQ75 786 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 RAB6BQ9NRW1 208 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 HOMER3Q9NSC5 361 aa23.62■■□□□ 1.37
HLA-C-209ENST00000495835 GCN1Q92616 2671 aaKnown RBP23.62■■□□□ 1.37
HLA-C-209ENST00000495835 UBA6A0AVT1 1052 aaPredicted RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 LIN7AO14910 233 aaPredicted RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 STAT5AP42229 794 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 MC1RQ01726 317 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 PLOD1Q02809 727 aaPredicted RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 ACVR1Q04771 509 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 SIX1Q15475 284 aaPredicted RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 DBN1Q16643 649 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 TBR1Q16650 682 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 DNTTIP2Q5QJE6 756 aaKnown RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 ARMC6Q6NXE6 501 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 C6orf15Q6UXA7 325 aaPredicted RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 CERS6Q6ZMG9 384 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 RASGRP3Q8IV61 690 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 TAB3Q8N5C8 712 aaPredicted RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 EXTL1Q92935 676 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 PIH1D1Q9NWS0 290 aaKnown RBP23.61■■□□□ 1.37
HLA-C-209ENST00000495835 FAM8A1Q9UBU6 413 aa23.61■■□□□ 1.37
HLA-C-209ENST00000495835 LOC101059948A0A1B0GTJ6 334 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 FTH1P02794 183 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 FOXN2P32314 431 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 PPARGP37231 505 aaPredicted RBP23.6■■□□□ 1.37
HLA-C-209ENST00000495835 HSD11B2P80365 405 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 PRKAA1Q13131 559 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 SNX1Q13596 522 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 TSTD2Q5T7W7 516 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 D2HGDHQ8N465 521 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 LILRA3Q8N6C8 439 aaPredicted RBP23.6■■□□□ 1.37
HLA-C-209ENST00000495835 CLDN19Q8N6F1 224 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 EXD3Q8N9H8 876 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 OR13J1Q8NGT2 312 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 NAT14Q8WUY8 206 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 MAP3K3Q99759 626 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 SEMA4CQ9C0C4 833 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 TFB2MQ9H5Q4 396 aaKnown RBP23.6■■□□□ 1.37
HLA-C-209ENST00000495835 EIF2B3Q9NR50 452 aaKnown RBP23.6■■□□□ 1.37
HLA-C-209ENST00000495835 SMARCAL1Q9NZC9 954 aa23.6■■□□□ 1.37
HLA-C-209ENST00000495835 OR6C74A6NCV1 312 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 B8ZZF3 427 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 SPAG6O75602 509 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 ZBTB11O95625 1053 aaPredicted RBP23.59■■□□□ 1.37
HLA-C-209ENST00000495835 APRTP07741 180 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 ARL4DP49703 201 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 DUS1LQ6P1R4 473 aaKnown RBP23.59■■□□□ 1.37
HLA-C-209ENST00000495835 AFTPHQ6ULP2 937 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 OR8K5Q8NH50 307 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 FERD3LQ96RJ6 166 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 TLR10Q9BXR5 811 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 ADNPQ9H2P0 1102 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 RARRES3Q9UL19 164 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 BOD1L1Q8NFC6 3051 aa23.59■■□□□ 1.37
HLA-C-209ENST00000495835 CCDC162PA2VCL2 907 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 OR56A5P0C7T3 313 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 CCNYL3P0C7X3 344 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 PRSS56P0CW18 603 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 RPL22P35268 128 aaKnown RBP23.58■■□□□ 1.37
HLA-C-209ENST00000495835 PPP1CAP62136 330 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 CYP4F2P78329 520 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 CCZ1BP86790 482 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 CCZ1P86791 482 aaPredicted RBP23.58■■□□□ 1.37
HLA-C-209ENST00000495835 CCDC38Q502W7 563 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 TMTC4Q5T4D3 741 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 BORAQ6PGQ7 559 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 OR4L1Q8NH43 312 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 LCN9Q8WX39 176 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 HDAC10Q969S8 669 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 SRMSQ9H3Y6 488 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 SYTL2Q9HCH5 934 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 C1GALT1Q9NS00 363 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 RPS6KL1Q9Y6S9 549 aa23.58■■□□□ 1.37
HLA-C-209ENST00000495835 HELZ2Q9BYK8 2649 aaKnown RBP23.57■■□□□ 1.36
HLA-C-209ENST00000495835 KIAA0754O94854 1291 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 RECKO95980 971 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 FGGP02679 453 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 ETS1P14921 441 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 TUBB3Q13509 450 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 BOP1Q14137 746 aaKnown RBP23.57■■□□□ 1.36
HLA-C-209ENST00000495835 PCID2Q5JVF3 399 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 OR4E2Q8NGC2 313 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 TFGQ92734 400 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-209ENST00000495835 STAMBPL1Q96FJ0 436 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 KCND3Q9UK17 655 aa23.57■■□□□ 1.36
HLA-C-209ENST00000495835 POMT2Q9UKY4 750 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms