RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PGAP3Q96FM1 320 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 FANCEQ9HB96 536 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 FAM207AQ9NSI2 230 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-219ENST00000495172 VPS18Q9P253 973 aa8.55□□□□□ -1.04
GARNL3-219ENST00000495172 PHF3Q92576 2039 aaKnown RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 A0A087X1B8 175 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 GOLGA8SH3BPF8 625 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 PRRG2O14669 202 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 PDHA1P08559 390 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 CDH3P22223 829 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 GNA15P30679 374 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 NR1H2P55055 460 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 DCDP81605 110 aaKnown RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 ADCY2Q08462 1091 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 ZNF766Q5HY98 468 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 BHLHB9Q6PI77 547 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 ABRAXAS1Q6UWZ7 409 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 ZNF547Q8IVP9 402 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 ZNF655Q8N720 491 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 RTL3Q8N8U3 475 aaKnown RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 IQUBQ8NA54 791 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 LCORQ96JN0 433 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 SPSB2Q99619 263 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 DPH2Q9BQC3 489 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 BDH2Q9BUT1 245 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 METTL14Q9HCE5 456 aaKnown RBP8.54□□□□□ -1.04
GARNL3-219ENST00000495172 FAM60AQ9NP50 221 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 ANKRD10Q9NXR5 420 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 STAP1Q9ULZ2 295 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 EDARQ9UNE0 448 aa8.54□□□□□ -1.04
GARNL3-219ENST00000495172 H3BMH7 237 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 ARHGEF9O43307 516 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 PRAMEF11O60813 436 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 PALMO75781 387 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 UQCRHP07919 91 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 PRR35P0CG20 571 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 ZNF7P17097 686 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-219ENST00000495172 CLCNKAP51800 687 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 SLC39A14Q15043 492 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 RPE65Q16518 533 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 RBBP7Q16576 425 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 KHDC1Q4VXA5 237 aaKnown RBP8.53□□□□□ -1.04
GARNL3-219ENST00000495172 ZCWPW2Q504Y3 356 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 FAM102AQ5T9C2 384 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-219ENST00000495172 FCRLBQ6BAA4 426 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 GJB7Q6PEY0 223 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 NEK10Q6ZWH5 1172 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 USP45Q70EL2 814 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 BNIPLQ7Z465 357 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 ADGRG6Q86SQ4 1221 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 METTL27Q8N6F8 245 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-219ENST00000495172 LMO3Q8TAP4 145 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 CCDC110Q8TBZ0 833 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 ZNF592Q92610 1267 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 RND1Q92730 232 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 PERPQ96FX8 193 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 FRMD6Q96NE9 622 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 SIGLEC12Q96PQ1 595 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 CD180Q99467 661 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 CINPQ9BW66 212 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-219ENST00000495172 CUEDC2Q9H467 287 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 BEX4Q9NWD9 120 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-219ENST00000495172 CTSFQ9UBX1 484 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 SERTAD3Q9UJW9 196 aa8.53□□□□□ -1.04
GARNL3-219ENST00000495172 A0A1B0GTH9 108 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 OR5H15A6NDH6 313 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 WASH4PA8MWX3 477 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 PSMD11O00231 422 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 STX10O60499 249 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 PMPCBO75439 489 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 SNRNP200O75643 2136 aaKnown RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 ZRANB2O95218 330 aaKnown RBP eCLIP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 CLDN7O95471 211 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 ITGAMP11215 1152 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 CYP2A6P11509 494 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 EPHB2P29323 1055 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 CSNK1DP48730 415 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 PAPOLAP51003 745 aaKnown RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 APBA1Q02410 837 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 ENPEPQ07075 957 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 NKG7Q16617 165 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 NFIL3Q16649 462 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 TFDP3Q5H9I0 405 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 FAM83HQ6ZRV2 1179 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 COX15Q7KZN9 410 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 TRIM73Q86UV7 250 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 HIPK1Q86Z02 1210 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 MCATQ8IVS2 390 aaKnown RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 SMYD4Q8IYR2 804 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 PGBD5Q8N414 524 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 ZNF397Q8NF99 534 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 SLC35C1Q96A29 364 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 SCRN2Q96FV2 425 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 CARD9Q9H257 536 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 SYNCQ9H7C4 482 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms