RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PDZD3	Q86UT5	571 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	SPATS2	Q86XZ4	545 aa	Known RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	C4orf33	Q8N1A6	199 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	BANP	Q8N9N5	519 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	STAG3L4	Q8TBR4	150 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	RDH11	Q8TC12	318 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	SREK1	Q8WXA9	508 aa	Known RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	KIAA1191	Q96A73	305 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	ARL8A	Q96BM9	186 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	FAM136A	Q96C01	138 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	ELF4	Q99607	663 aa	Predicted RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	MRPL57	Q9BQC6	102 aa	Known RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	MRPL46	Q9H2W6	279 aa	Known RBP	13.27	□□□□□ -0.29
APTX-231	ENST00000494973	PCOLCE2	Q9UKZ9	415 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	DOLK	Q9UPQ8	538 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	DNAJC16	Q9Y2G8	782 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	SLCO1B1	Q9Y6L6	691 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973	CSNK1G3	Q9Y6M4	447 aa		13.27	□□□□□ -0.29
APTX-231	ENST00000494973		A0A0C4DFX4	3053 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	PRR19	A6NJB7	356 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	PDZK1P1	A8MUH7	402 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	GOLGA8R	I6L899	631 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	KHNYN	O15037	678 aa	Known RBP	13.26	□□□□□ -0.29
APTX-231	ENST00000494973	CACNA1H	O95180	2353 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.26	□□□□□ -0.29
APTX-231	ENST00000494973	CD1D	P15813	335 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	TAC1	P20366	129 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	HIST1H2AD	P20671	130 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	MAP4	P27816	1152 aa	Known RBP	13.26	□□□□□ -0.29
APTX-231	ENST00000494973	AP1S2	P56377	157 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	BPTF	Q12830	3046 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	NFE2L1	Q14494	772 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	ZNF423	Q2M1K9	1284 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	KIF19	Q2TAC6	998 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	UAP1L1	Q3KQV9	507 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	TTMP	Q5BVD1	217 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	TRIM61	Q5EBN2	209 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	ACSBG2	Q5FVE4	666 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	KCTD16	Q68DU8	428 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	ABRAXAS1	Q6UWZ7	409 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	SH2D5	Q6ZV89	423 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	CENPL	Q8N0S6	344 aa	Predicted RBP	13.26	□□□□□ -0.29
APTX-231	ENST00000494973	RAB42	Q8N4Z0	105 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	KCTD4	Q8WVF5	259 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	CCDC126	Q96EE4	140 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	SCYL1	Q96KG9	808 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	HIST1H2AH	Q96KK5	128 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	HIST1H2AJ	Q99878	128 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	H2AFJ	Q9BTM1	129 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	STN1	Q9H668	368 aa	Known RBP	13.26	□□□□□ -0.29
APTX-231	ENST00000494973	CAPN10	Q9HC96	672 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	CDYL	Q9Y232	598 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	KCNK6	Q9Y257	313 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	PRKAB1	Q9Y478	270 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973		R4GN57	208 aa		13.26	□□□□□ -0.29
APTX-231	ENST00000494973	TP53BP1	Q12888	1972 aa	Predicted RBP	13.25	□□□□□ -0.29
APTX-231	ENST00000494973	KIR2DS5	A0A0G2JLQ3	304 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973		A0A0G2JNG1	304 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	KIR2DS3	K7RE56	304 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	BTN3A1	O00481	513 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	AQP9	O43315	295 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	ZBTB14	O43829	449 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TYROBP	O43914	113 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	KERA	O60938	352 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	LRP3	O75074	770 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	MATN4	O95460	622 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TSPAN12	O95859	305 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	FUCA1	P04066	466 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	S100B	P04271	92 aa	Predicted RBP	13.25	□□□□□ -0.29
APTX-231	ENST00000494973	ANXA6	P08133	673 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	ALPPL2	P10696	532 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	F3	P13726	295 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TFEB	P19484	476 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	PREP	P48147	710 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	CCT8	P50990	548 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	ATXN3	P54252	364 aa	Predicted RBP	13.25	□□□□□ -0.29
APTX-231	ENST00000494973	PPP2R2A	P63151	447 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	ASPH	Q12797	758 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	GRIK2	Q13002	908 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	KIR2DS5	Q14953	304 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	INAVA	Q3KP66	663 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	PRRT3	Q5FWE3	981 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	PPM1J	Q5JR12	505 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	CDKL4	Q5MAI5	379 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TMEM207	Q6UWW9	146 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	LAYN	Q6UX15	382 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TAF8	Q7Z7C8	310 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	DCUN1D3	Q8IWE4	304 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	RBM12B	Q8IXT5	1001 aa	Known RBP	13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TCAIM	Q8N3R3	496 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.25	□□□□□ -0.29
APTX-231	ENST00000494973	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.25	□□□□□ -0.29
APTX-231	ENST00000494973	MCOLN3	Q8TDD5	553 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	EEF1AKMT1	Q8WVE0	214 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	ANKRD49	Q8WVL7	239 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	SLC30A3	Q99726	388 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	SELENOS	Q9BQE4	189 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	LRRC61	Q9BV99	259 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TMEM168	Q9H0V1	697 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	OR52A5	Q9H2C5	316 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms