RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ANKRD18BA2A2Z9 1011 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 B4DLN1 442 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 SSX4O60224 188 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 IGLV1-44P01699 117 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 CSH1P0DML2 217 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 CSH2P0DML3 217 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 ALOX12P18054 663 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 MRPL12P52815 198 aaKnown RBP3.89□□□□□ -1.79
ITGB1-216ENST00000493758 RPS18P62269 152 aaKnown RBP3.89□□□□□ -1.79
ITGB1-216ENST00000493758 DLG2Q15700 870 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 C15orf59Q2T9L4 293 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-216ENST00000493758 KRTAP27-1Q3LI81 207 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 SPATA1Q5VX52 437 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 C15orf39Q6ZRI6 1047 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 BRINP3Q76B58 766 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 WDR20Q8TBZ3 569 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 DAZLQ92904 295 aaKnown RBP3.89□□□□□ -1.79
ITGB1-216ENST00000493758 MTERF3Q96E29 417 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 POLR3GLQ9BT43 218 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 FSD1Q9BTV5 496 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 KIFC3Q9BVG8 833 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 TEX12Q9BXU0 123 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 ARRDC1-AS1Q9H2J1 176 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 MMP27Q9H306 513 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 OSGEPL1Q9H4B0 414 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 SIX2Q9NPC8 291 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 SCRT2Q9NQ03 307 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 NPAP1Q9NZP6 1156 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 FLRT3Q9NZU0 649 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 GRIP1Q9Y3R0 1128 aa3.89□□□□□ -1.79
ITGB1-216ENST00000493758 IGHV4-61A0A0C4DH41 118 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 PRSS51A0A1B0GVH4 220 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 CLIC2O15247 247 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 SH3BP5O60239 455 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 RNASEH1O60930 286 aaKnown RBP3.88□□□□□ -1.79
ITGB1-216ENST00000493758 CAVIN2O95810 425 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 IGHV4-59P01825 116 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 TRIM21P19474 475 aaKnown RBP3.88□□□□□ -1.79
ITGB1-216ENST00000493758 SLC6A6P31641 620 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 ERVK11-1P61568 191 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 PPP2R2BQ00005 443 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 CDK3Q00526 305 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 ITGA9Q13797 1035 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 TMCO3Q6UWJ1 677 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 CRYBG2Q8N1P7 616 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 PTPMT1Q8WUK0 201 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-216ENST00000493758 OR6C1Q96RD1 312 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 BTBD10Q9BSF8 475 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 C16orf70Q9BSU1 422 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 UBA5Q9GZZ9 404 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 ACKR4Q9NPB9 350 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 TBC1D29Q9UFV1 150 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 SPIN1Q9Y657 262 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-216ENST00000493758 FLT1P17948 1338 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 DISP3Q9P2K9 1392 aa3.88□□□□□ -1.79
ITGB1-216ENST00000493758 LOC102723996A0A087X1L8 192 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 A0A1W2PQ09 198 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 A6NL46 340 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 MAGEB17A8MXT2 336 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 PSMD14O00487 310 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 OR10H2O60403 315 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 PRAMEF11O60813 436 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 MED24O75448 989 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 WDHD1O75717 1129 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-216ENST00000493758 EML2O95834 649 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 ALDH4A1P30038 563 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 CHRNB4P30926 498 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 WNT5AP41221 380 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 CUL4AQ13619 759 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 PCLAFQ15004 111 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 ALS2CLQ60I27 953 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 ADGRA1Q86SQ6 560 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 LDB1Q86U70 411 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-216ENST00000493758 KBTBD6Q86V97 674 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 CEP57Q86XR8 500 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 POC5Q8NA72 575 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 HSD17B8Q92506 261 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 PSD2Q9BQI7 771 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 RTP3Q9BQQ7 232 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 RHNO1Q9BSD3 238 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 CHMP4AQ9BY43 222 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 VN1R1Q9GZP7 353 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 CHMP1AQ9HD42 196 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-216ENST00000493758 ECHDC1Q9NTX5 307 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 ZNF701Q9NV72 531 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-216ENST00000493758 RHCGQ9UBD6 479 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 HACL1Q9UJ83 578 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 OSGIN1Q9UJX0 560 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 SLC7A7Q9UM01 511 aa3.87□□□□□ -1.79
ITGB1-216ENST00000493758 A0A1W2PRB8 838 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 GLOD5A6NK44 160 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 DUXAA6NLW8 204 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 HEPACAM2A8MVW5 462 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 HHLA1C9JL84 531 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 CTDSP2O14595 271 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 TCERG1O14776 1098 aaKnown RBP3.86□□□□□ -1.79
ITGB1-216ENST00000493758 ATP6V0E1O15342 81 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 AVILO75366 819 aa3.86□□□□□ -1.79
ITGB1-216ENST00000493758 EFNA1P20827 205 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-216ENST00000493758 CASP2P42575 452 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms