RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 PLOD1Q02809 727 aaPredicted RBP16.47■□□□□ 0.23
RER1-208ENST00000493207 FOXC1Q12948 553 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 NR1D2Q14995 579 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 KYNUQ16719 465 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 STRA8Q7Z7C7 330 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 PDZD3Q86UT5 571 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 VRK3Q8IV63 474 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 CHCHD4Q8N4Q1 142 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 ASZ1Q8WWH4 475 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 SH3KBP1Q96B97 665 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 NDNQ99608 321 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 AARSD1Q9BTE6 412 aaKnown RBP16.47■□□□□ 0.23
RER1-208ENST00000493207 SLC40A1Q9NP59 571 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 SMYD2Q9NRG4 433 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 KCNK4Q9NYG8 393 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 CDYLQ9Y232 598 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 PSAT1Q9Y617 370 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 COMMD10Q9Y6G5 202 aa16.47■□□□□ 0.23
RER1-208ENST00000493207 COL27A1Q8IZC6 1860 aaPredicted RBP16.47■□□□□ 0.23
RER1-208ENST00000493207 CXorf49A8MYA2 514 aaPredicted RBP16.46■□□□□ 0.23
RER1-208ENST00000493207 KPNA5O15131 536 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 GPC4O75487 556 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 STX2P32856 288 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 CD151P48509 253 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 GPR18Q14330 331 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 AMZ1Q400G9 498 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 RBM20Q5T481 1227 aaKnown RBP16.46■□□□□ 0.23
RER1-208ENST00000493207 UBAP2Q5T6F2 1119 aaKnown RBP16.46■□□□□ 0.23
RER1-208ENST00000493207 TMEM26Q6ZUK4 368 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 CYS1Q717R9 158 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 RAB44Q7Z6P3 723 aaPredicted RBP16.46■□□□□ 0.23
RER1-208ENST00000493207 SLC26A11Q86WA9 606 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 RELL1Q8IUW5 271 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 GSPT2Q8IYD1 628 aaKnown RBP16.46■□□□□ 0.23
RER1-208ENST00000493207 SLC22A15Q8IZD6 547 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 FBF1Q8TES7 1133 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 CDKL2Q92772 493 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 ATXN7L3BQ96GX2 97 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.46■□□□□ 0.23
RER1-208ENST00000493207 CDC42EP4Q9H3Q1 356 aaKnown RBP16.46■□□□□ 0.23
RER1-208ENST00000493207 LRRN3Q9H3W5 708 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 NSMCE4AQ9NXX6 385 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 NINJ2Q9NZG7 142 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 HEBP2Q9Y5Z4 205 aa16.46■□□□□ 0.23
RER1-208ENST00000493207 A0A1W2PQM1 296 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 FAM159BA6NKW6 160 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 ZW10O43264 779 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 B4GAT1O43505 415 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 SPAG6O75602 509 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 TOP3BO95985 862 aaKnown RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 PPM1FP49593 454 aaPredicted RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 CLCN7P51798 805 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 KRT33BQ14525 404 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 KBTBD12Q3ZCT8 623 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 PLEKHS1Q5SXH7 462 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 HES3Q5TGS1 186 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 NKAIN2Q5VXU1 208 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 RBM12BQ8IXT5 1001 aaKnown RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 ZBTB2Q8N680 514 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 GPATCH11Q8N954 259 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 SIDT2Q8NBJ9 832 aaKnown RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 PHC3Q8NDX5 983 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 TFGQ92734 400 aaPredicted RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 KCNJ9Q92806 393 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 FERD3LQ96RJ6 166 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 GFM1Q96RP9 751 aaKnown RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 SLC30A3Q99726 388 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 TBC1D10AQ9BXI6 508 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 ANKZF1Q9H8Y5 726 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 TSR3Q9UJK0 312 aaKnown RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 ATXN7L1Q9ULK2 861 aaPredicted RBP16.45■□□□□ 0.22
RER1-208ENST00000493207 MED16Q9Y2X0 877 aa16.45■□□□□ 0.22
RER1-208ENST00000493207 IGHV1OR21-1A0A087WYE8 117 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 NTN3O00634 580 aaPredicted RBP16.44■□□□□ 0.22
RER1-208ENST00000493207 HYAL3O43820 417 aaPredicted RBP16.44■□□□□ 0.22
RER1-208ENST00000493207 VPS26AO75436 327 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 SLCO2B1O94956 709 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 ACSL3O95573 720 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 C1QAP02745 245 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 FAM153BP0C7A2 387 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 ACADLP28330 430 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 MAPK9P45984 424 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 SPIDRQ14159 915 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 EFTUD2Q15029 972 aaKnown RBP eCLIP16.44■□□□□ 0.223e-7■■□□□ 14.2
RER1-208ENST00000493207 FAM153CQ494X1 144 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 SPNS2Q8IVW8 549 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 CTAGE3PQ8IX95 158 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 GIMAP7Q8NHV1 300 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 WDR48Q8TAF3 677 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 JPH3Q8WXH2 748 aaPredicted RBP16.44■□□□□ 0.22
RER1-208ENST00000493207 AHCYL2Q96HN2 611 aaKnown RBP16.44■□□□□ 0.22
RER1-208ENST00000493207 GPR21Q99679 349 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 UCK1Q9HA47 277 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 LATS2Q9NRM7 1088 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.44■□□□□ 0.22
RER1-208ENST00000493207 CORO1CQ9ULV4 474 aaPredicted RBP16.44■□□□□ 0.22
RER1-208ENST00000493207 COLEC10Q9Y6Z7 277 aa16.44■□□□□ 0.22
RER1-208ENST00000493207 V9GYY5 206 aaPredicted RBP16.44■□□□□ 0.22
RER1-208ENST00000493207 FAM149AA5PLN7 773 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms