RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GSDMDP57764 484 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 NFKB2Q00653 900 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 PLOD1Q02809 727 aaPredicted RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 TLE1Q04724 770 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 SKIDA1Q1XH10 827 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 LACTB2Q53H82 288 aaPredicted RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 DENND5AQ6IQ26 1287 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 PWWP2BQ6NUJ5 590 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 TCTN3Q6NUS6 607 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 PTRH1Q86Y79 214 aaKnown RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 LRRC57Q8N9N7 239 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 STYXQ8WUJ0 223 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 LCN9Q8WX39 176 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 LRFN5Q96NI6 719 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 FERD3LQ96RJ6 166 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 TTC1Q99614 292 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 BAG1Q99933 345 aaPredicted RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 TWSG1Q9GZX9 223 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 SRMSQ9H3Y6 488 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 TFB2MQ9H5Q4 396 aaKnown RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 MVB12BQ9H7P6 319 aa12.14□□□□□ -0.47
COL6A1-205ENST00000492851 NLE1Q9NVX2 485 aaPredicted RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 CFAP20Q9Y6A4 193 aaKnown RBP12.14□□□□□ -0.47
COL6A1-205ENST00000492851 IGLV3-16A0A075B6K0 115 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 ERI2A8K979 691 aaKnown RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 KDM1AO60341 852 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 SCRG1O75711 98 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 MSL3P1P0C860 447 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 EBLN1P0CF75 366 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 ACRV1P26436 265 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 PTPN4P29074 926 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 NSG1P42857 185 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 TMPRSS15P98073 1019 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 CACNG1Q06432 222 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 KLRB1Q12918 225 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 ZRANB3Q5FWF4 1079 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 LYPLAL1Q5VWZ2 237 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 KCTD11Q693B1 232 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 TAS2R42Q7RTR8 314 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 SYVN1Q86TM6 617 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 TMEM126BQ8IUX1 230 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 APLFQ8IW19 511 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 TEX19Q8NA77 164 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 OR4E2Q8NGC2 313 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 OR13C4Q8NGS5 318 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 CPT1BQ92523 772 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 ALG3Q92685 438 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 CDKN2AIPNLQ96HQ2 116 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 FRMD8P1Q9BZ68 369 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 LACRTQ9GZZ8 138 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 SOHLH2Q9NX45 425 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 SERTAD3Q9UJW9 196 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 FARSAQ9Y285 508 aaKnown RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 BTRCQ9Y297 605 aa12.13□□□□□ -0.47
COL6A1-205ENST00000492851 MRPS18BQ9Y676 258 aaKnown RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 ASH1LQ9NR48 2969 aaKnown RBP12.13□□□□□ -0.47
COL6A1-205ENST00000492851 TRBV5-4A0A0C4DH59 114 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 CDC14CA4D256 554 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 GRID2IPA4D2P6 1211 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 LIN7AO14910 233 aaPredicted RBP12.12□□□□□ -0.47
COL6A1-205ENST00000492851 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 SGTAO43765 313 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 RFPL1O75677 317 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 NTRK1P04629 796 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 POLR2CP19387 275 aaPredicted RBP12.12□□□□□ -0.47
COL6A1-205ENST00000492851 CDH3P22223 829 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 PMS2P54278 862 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 PPP1CAP62136 330 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 ITIH4Q14624 930 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 KCNAB1Q14722 419 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 IZUMO3Q5VZ72 239 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 HOOK3Q86VS8 718 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 RNF10Q8N5U6 811 aaKnown RBP12.12□□□□□ -0.47
COL6A1-205ENST00000492851 FAM71DQ8N9W8 422 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 CT55Q8WUE5 264 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL6A1-205ENST00000492851 ZNF501Q96CX3 271 aaPredicted RBP12.12□□□□□ -0.47
COL6A1-205ENST00000492851 DPH2Q9BQC3 489 aaPredicted RBP12.12□□□□□ -0.47
COL6A1-205ENST00000492851 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 ACTL8Q9H568 366 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 FAM96AQ9H5X1 160 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 FAM8A1Q9UBU6 413 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 POMT2Q9UKY4 750 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 MAN2B2Q9Y2E5 1009 aa12.12□□□□□ -0.47
COL6A1-205ENST00000492851 REXO2Q9Y3B8 237 aaKnown RBP12.12□□□□□ -0.47
COL6A1-205ENST00000492851 GSAPA4D1B5 854 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 C2orf74A8MZ97 194 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 PYCARD-AS1I3L0S3 204 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 METTL18O95568 372 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 AP2A1O95782 977 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 FTH1P02794 183 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 HBQ1P09105 142 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 RAB40ALP0C0E4 278 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms