RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ASB1	Q9Y576	335 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	HS3ST3B1	Q9Y662	390 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	RYR3	Q15413	4870 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PCM1	Q15154	2024 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM237A	A0A1B0GTK4	181 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	OR5H15	A6NDH6	313 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	TTI1	O43156	1089 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	MAP3K7	O43318	606 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	NUAK1	O60285	661 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	USP1	O94782	785 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	LETM1	O95202	739 aa	Predicted RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	CNOT4	O95628	575 aa	Known RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	KRT5	P13647	590 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	NID1	P14543	1247 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF8	P17098	575 aa	Predicted RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	DES	P17661	470 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	CDH3	P22223	829 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	KRT9	P35527	623 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	USP8	P40818	1118 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	PRCP	P42785	496 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	CHRNA4	P43681	627 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	CSNK1D	P48730	415 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	LMAN1	P49257	510 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	SCNN1B	P51168	640 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	KPNA2	P52292	529 aa	Known RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	BPIFB4	P59827	614 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC6A3	Q01959	620 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	KRTAP1-1	Q07627	177 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	PMPCA	Q10713	525 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	LBR	Q14739	615 aa	Known RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	RBBP7	Q16576	425 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	NKAIN1	Q4KMZ8	207 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	COBLL1	Q53SF7	1204 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	ATG9B	Q674R7	924 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	HEPHL1	Q6MZM0	1159 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	RHBDD2	Q6NTF9	364 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	GJB7	Q6PEY0	223 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	CRTC3	Q6UUV7	619 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	PRSS57	Q6UWY2	283 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	OLFML1	Q6UWY5	402 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	ABRAXAS1	Q6UWZ7	409 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	SHISA6	Q6ZSJ9	500 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	RRAGA	Q7L523	313 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC26A9	Q7LBE3	791 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	OOSP2	Q86WS3	158 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	CHERP	Q8IWX8	916 aa	Known RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	LRRC75A-AS1	Q8N1F1	130 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	RPRML	Q8N4K4	120 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	MSANTD4	Q8NCY6	345 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	OR11G2	Q8NGC1	345 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	PROKR1	Q8TCW9	393 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	ZFPM2	Q8WW38	1151 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	PSMF1	Q92530	271 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF592	Q92610	1267 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	N4BP2L2	Q92802	583 aa	Predicted RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC35C1	Q96A29	364 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	KREMEN1	Q96MU8	473 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	TRIM51	Q9BSJ1	452 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	RIOK2	Q9BVS4	552 aa	Known RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	CARD9	Q9H257	536 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	ARFGAP3	Q9NP61	516 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	TXLNG	Q9NUQ3	528 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	DHCR7	Q9UBM7	475 aa	Known RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC23A2	Q9UGH3	650 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	COQ4	Q9Y3A0	265 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	HRH3	Q9Y5N1	445 aa		5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.18	□□□□□ -1.58
SEC13-219	ENST00000492602	MGAM2	Q2M2H8	2515 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	OR6C74	A6NCV1	312 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM72C	H0Y354	149 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602		J3KR12	359 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PES1	O00541	588 aa	Known RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PMM2	O15305	246 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	DNAJB6	O75190	326 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PALM	O75781	387 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	WFS1	O76024	890 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	LRIG2	O94898	1065 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	CP	P00450	1065 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	HP	P00738	406 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ERBB2	P04626	1255 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PRR35	P0CG20	571 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PNMA6A	P0CW24	399 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	CTPS1	P17812	591 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	UQCRC1	P31930	480 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PTGS2	P35354	604 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	HAL	P42357	657 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ARSE	P51690	589 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	NUP107	P57740	925 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	MCCD1	P59942	119 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	DEFA6	Q01524	100 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC25A52	Q3SY17	297 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FLYWCH1	Q4VC44	716 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	TFDP3	Q5H9I0	405 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF648	Q5T619	568 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM72A	Q5TYM5	149 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	MANEAL	Q5VSG8	457 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms