RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 SGSM3Q96HU1 749 aa23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 SLC45A3Q96JT2 553 aa23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 TLR10Q9BXR5 811 aa23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 MVB12BQ9H7P6 319 aa23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 PDE7BQ9NP56 450 aa23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 EIF2B3Q9NR50 452 aaKnown RBP23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 SMARCAL1Q9NZC9 954 aa23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 COL6A6A6NMZ7 2263 aa23.08■■□□□ 1.29
CTDSP1-211ENST00000492545 FGGP02679 453 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 WT1P19544 449 aaPredicted RBP23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 PPARGP37231 505 aaPredicted RBP23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 SH3BP2P78314 561 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 PLOD1Q02809 727 aaPredicted RBP23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 ACY1Q03154 408 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 ACVR1Q04771 509 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 CCDC38Q502W7 563 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 DNTTIP2Q5QJE6 756 aaKnown RBP23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 TSTD2Q5T7W7 516 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 AFTPHQ6ULP2 937 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 PPP1R3BQ86XI6 285 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 CLDN19Q8N6F1 224 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 OR13J1Q8NGT2 312 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 NAT14Q8WUY8 206 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 ARHGAP9Q9BRR9 750 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 SLC12A9Q9BXP2 914 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 ULBP3Q9BZM4 244 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 OR52A5Q9H2C5 316 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 GPN2Q9H9Y4 310 aaPredicted RBP23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 PPP2R2CQ9Y2T4 447 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 BAHCC1Q9P281 2608 aa23.07■■□□□ 1.28
CTDSP1-211ENST00000492545 IGHV5-51A0A0C4DH38 117 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 UBA6A0AVT1 1052 aaPredicted RBP23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 CCDC162PA2VCL2 907 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 GOLGA6L3A6NEY3 463 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 ZNF891A8MT65 544 aaPredicted RBP23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 LIN7AO14910 233 aaPredicted RBP23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 FTH1P02794 183 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 ETS1P14921 441 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 FOXN2P32314 431 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 RPL22P35268 128 aaKnown RBP23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 ARL4DP49703 201 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 HSD11B2P80365 405 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 PRKAA1Q13131 559 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 TIPARPQ7Z3E1 657 aaKnown RBP23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 RASGRP3Q8IV61 690 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 LILRA3Q8N6C8 439 aaPredicted RBP23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 SIDT2Q8NBJ9 832 aaKnown RBP23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 HDAC10Q969S8 669 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 CATSPER2Q96P56 530 aa23.06■■□□□ 1.28
CTDSP1-211ENST00000492545 OR6C74A6NCV1 312 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 MT-ND3P03897 115 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 MC1RQ01726 317 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 LY6DQ14210 128 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 CRTC2Q53ET0 693 aaPredicted RBP23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 DUS1LQ6P1R4 473 aaKnown RBP23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 C6orf15Q6UXA7 325 aaPredicted RBP23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 GSTA5Q7RTV2 222 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 LCN9Q8WX39 176 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 FERD3LQ96RJ6 166 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 MAP3K3Q99759 626 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 SRMSQ9H3Y6 488 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 TFB2MQ9H5Q4 396 aaKnown RBP23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 RARRES3Q9UL19 164 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 TCAF1Q9Y4C2 921 aa23.05■■□□□ 1.28
CTDSP1-211ENST00000492545 CEP104O60308 925 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 ZBTB11O95625 1053 aaPredicted RBP23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 OR56A5P0C7T3 313 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 PRSS56P0CW18 603 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 STAT5AP42229 794 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 GRIA1P42261 906 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 PPP1CAP62136 330 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 CDK16Q00536 496 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 TBR1Q16650 682 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 LINC00303Q3SY05 128 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 D2HGDHQ8N465 521 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 PPHLN1Q8NEY8 458 aaKnown RBP23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 OR4E2Q8NGC2 313 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 OR4L1Q8NH43 312 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 TFGQ92734 400 aaPredicted RBP23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 EXTL1Q92935 676 aa23.04■■□□□ 1.28
CTDSP1-211ENST00000492545 CCDC78A2IDD5 438 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 SPAG6O75602 509 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 GOT2P00505 430 aaKnown RBP23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 CCNYL3P0C7X3 344 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 ZSCAN5DPP0CG00 497 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 PRAMEP78395 509 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 TUBB3Q13509 450 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 AARS2Q5JTZ9 985 aaKnown RBP23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 PCID2Q5JVF3 399 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 TMTC4Q5T4D3 741 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 GLIS1Q8NBF1 620 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 OR6P1Q8NGX9 317 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 OR8K5Q8NH50 307 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 IL22Q9GZX6 179 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 RPS6KL1Q9Y6S9 549 aa23.03■■□□□ 1.28
CTDSP1-211ENST00000492545 LOC101059948A0A1B0GTJ6 334 aa23.02■■□□□ 1.28
CTDSP1-211ENST00000492545 FOLR1P15328 257 aa23.02■■□□□ 1.28
CTDSP1-211ENST00000492545 PDHA2P29803 388 aa23.02■■□□□ 1.28
CTDSP1-211ENST00000492545 NPY2RP49146 381 aa23.02■■□□□ 1.28
CTDSP1-211ENST00000492545 BOP1Q14137 746 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 415.3 ms