RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SPAG6O75602 509 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 C1QL1O75973 258 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 METTL18O95568 372 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 KLK3P07288 261 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 CDH3P22223 829 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 DLSTP36957 453 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 STAT5AP42229 794 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 PRAMEP78395 509 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 SRSF6Q13247 344 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 ITIH4Q14624 930 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 CRTC2Q53ET0 693 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 AARS2Q5JTZ9 985 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 KCTD11Q693B1 232 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 DENND5AQ6IQ26 1287 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 PRICKLE2Q7Z3G6 844 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC13A5Q86YT5 568 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 APOBEC4Q8WW27 367 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 STARD8Q92502 1023 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 N4BP2L2Q92802 583 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC41A2Q96JW4 573 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 GORASP1Q9BQQ3 440 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC25A18Q9H1K4 315 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 LZTFL1Q9NQ48 299 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 FGF21Q9NSA1 209 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 TUBD1Q9UJT1 453 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 PPP2R2CQ9Y2T4 447 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 IGSF10Q6WRI0 2623 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 KIF26BQ2KJY2 2108 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 GSAPA4D1B5 854 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 ZSCAN12O43309 604 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 LIASO43766 372 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 KIF1CO43896 1103 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 KATNA1O75449 491 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 FAM87AP0C7U9 286 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 PLA2G2AP14555 144 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 ADRA1DP25100 572 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 RPS15P62841 145 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 CYP4F2P78329 520 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 OLIG2Q13516 323 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 FASTKD1Q53R41 847 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 C16orf46Q6P387 395 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 ATG14Q6ZNE5 492 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 TAB3Q8N5C8 712 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 OR4E2Q8NGC2 313 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 MAP3K3Q99759 626 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 SPRY4Q9C004 299 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 COG4Q9H9E3 785 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 RAB6BQ9NRW1 208 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 POLG2Q9UHN1 485 aa16.15■□□□□ 0.18
PDLIM2-217ENST00000491330 A0A0U1RQJ8 604 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 LOC101059948A0A1B0GTJ6 334 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 C2orf74A8MZ97 194 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 C21orf140B9A014 251 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 DLGAP3O95886 979 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 PRKAR1AP10644 381 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 ARSDP51689 593 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 TUBB4BP68371 445 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 SH3BP2P78314 561 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 SARNPP82979 210 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 CDC20Q12834 499 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 TUBB2AQ13885 445 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 OASLQ15646 514 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 CCNG2Q16589 344 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 LINC00303Q3SY05 128 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 CAPRIN2Q6IMN6 1127 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 TTC23LQ6PF05 361 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 AFTPHQ6ULP2 937 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 TMEM126BQ8IUX1 230 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 GALNT6Q8NCL4 622 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 PPHLN1Q8NEY8 458 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 GPR150Q8NGU9 434 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 OR6P1Q8NGX9 317 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 TFGQ92734 400 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 TUBB2BQ9BVA1 445 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 GPR87Q9BY21 358 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 ETNK1Q9HBU6 452 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 C1GALT1Q9NS00 363 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 KCND1Q9NSA2 647 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 SEMA5BQ9P283 1151 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 SERTAD3Q9UJW9 196 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 R3HDM2Q9Y2K5 976 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 JRKLQ9Y4A0 524 aa16.14■□□□□ 0.17
PDLIM2-217ENST00000491330 IGLV3-16A0A075B6K0 115 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 IGHV5-51A0A0C4DH38 117 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 TRBV5-4A0A0C4DH59 114 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 CCDC78A2IDD5 438 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 CPNE3O75131 537 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 RECKO95980 971 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 RPN2P04844 631 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 APRTP07741 180 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 GDF10P55107 478 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 POLE2P56282 527 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 KCNAB2Q13303 367 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 MSLNQ13421 630 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 SNX1Q13596 522 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 TIPARPQ7Z3E1 657 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 UNC5BQ8IZJ1 945 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 D2HGDHQ8N465 521 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 EXD3Q8N9H8 876 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms