RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 UGT3A2Q3SY77 523 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 ARMCX4Q5H9R4 360 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 CES5AQ6NT32 575 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 ZNF549Q6P9A3 640 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 NEK10Q6ZWH5 1172 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 KRTCAP2Q8N6L1 136 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 SLC13A3Q8WWT9 602 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 Q96MT0 163 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 GPR63Q9BZJ6 419 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 SDR39U1Q9NRG7 319 aaPredicted RBP9.68□□□□□ -0.86
ERCC3-208ENST00000491292 ANKMY1Q9P2S6 941 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 UGT2A1Q9Y4X1 527 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 IPPQ9Y573 584 aa9.68□□□□□ -0.86
ERCC3-208ENST00000491292 MLYCDO95822 493 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 VIPP01282 170 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 ALPLP05186 524 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 UROSP10746 265 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 TAF12Q16514 161 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SOWAHCQ53LP3 525 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SIRPB2Q5JXA9 342 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 PPP2R2DQ66LE6 453 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 HACD2Q6Y1H2 254 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 COLGALT2Q8IYK4 626 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 LIX1Q8N485 282 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SUN5Q8TC36 379 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 ISL2Q96A47 359 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 IPPKQ9H8X2 491 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 WDR6Q9NNW5 1121 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CRTAC1Q9NQ79 661 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 C8orf4Q9NR00 106 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 PAQR5Q9NXK6 330 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 DKK3Q9UBP4 350 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SOBPA7XYQ1 873 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 E9PAM4 449 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CBX4O00257 560 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 ZW10O43264 779 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 TBX18O95935 607 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 THP07101 528 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 PFKLP17858 780 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 HRH2P25021 359 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CLK3P49761 638 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CLCNKBP51801 687 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 RACK1P63244 317 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 ADARB1P78563 741 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CDK5R2Q13319 367 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SZRD1Q7Z422 152 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 RBM23Q86U06 439 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 GALNT12Q8IXK2 581 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 TAGAPQ8N103 731 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CELF2-AS1Q8N7Q2 184 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 TNKS2Q9H2K2 1166 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 COQ3Q9NZJ6 369 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 VAPAQ9P0L0 249 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 PRG3Q9Y2Y8 225 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 PCDHA9Q9Y5H5 950 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 FOCADQ5VW36 1801 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 NRCAMQ92823 1304 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 IGKV6-21A0A0C4DH24 114 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SLC12A8A0AV02 714 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 C2orf81A6NN90 581 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 MEIS3P2A8K0S8 358 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CPNE3O75131 537 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 LEPRP48357 1165 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 TIGD6Q17RP2 521 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SMU1Q2TAY7 513 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SNAP47Q5SQN1 464 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 ZNF648Q5T619 568 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 THEM5Q8N1Q8 247 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 OR5K1Q8NHB7 308 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 EEF1AKMT1Q8WVE0 214 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 KLRG1Q96E93 195 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 CDK5RAP1Q96SZ6 601 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 UHRF1Q96T88 793 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 RMND5AQ9H871 391 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 GPN2Q9H9Y4 310 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 OLA1Q9NTK5 396 aaKnown RBP9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SLCO3A1Q9UIG8 710 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 SCN1AP35498 2009 aa9.67□□□□□ -0.86
ERCC3-208ENST00000491292 M0R129 80 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ULK1O75385 1050 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 IFITM3Q01628 133 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 SMARCB1Q12824 385 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 VASH1Q7L8A9 365 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ZNF605Q86T29 641 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 FAM217AQ8IXS0 508 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 C7orf57Q8NEG2 295 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 AMBRA1Q9C0C7 1298 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 SLC25A51Q9H1U9 297 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TXNRD2Q9NNW7 524 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TIGARQ9NQ88 270 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 AIG1Q9NVV5 245 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 SNX6Q9UNH7 406 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TESMINQ9Y4I5 508 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 PER2O15055 1255 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 OR1I1O60431 355 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 HAPLN1P10915 354 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms