RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 E2F8A0AVK6 867 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 WIPF3A6NGB9 483 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CAPN8A6NHC0 703 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC15A5A6NIM6 579 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CD8B2A6NJW9 211 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 A8MUI8 341 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FOXO6A8MYZ6 492 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 HACD1B0YJ81 288 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TCP10L2B9ZVM9 353 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TRIM49D1C9J1S8 452 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PI4K2BG5E9Z4 385 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 H7C0C1 242 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 H7C1Q1 480 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PYCARD-AS1I3L0S3 204 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 APOC4-APOC2K7ER74 178 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PDLIM1O00151 329 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 VWA5AO00534 786 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FCHO1O14526 889 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CASQ2O14958 399 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NCAM2O15394 837 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TMPRSS11DO60235 418 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PRPSAP2O60256 369 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CCNT2O60583 730 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 USP12O75317 370 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SNNO75324 88 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SKAP2O75563 359 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CBX6O95503 412 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TOP3BO95985 862 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CCNE2O96020 404 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 APOC2P02655 101 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 POLBP06746 335 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SETSIPP0DME0 302 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CCDC130P13994 396 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 HGFP14210 728 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CPA3P15088 417 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PDGFRAP16234 1089 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ATF7P17544 494 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 GM2AP17900 193 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CD58P19256 250 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TFEBP19484 476 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TPSB2P20231 275 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 GLRA2P23416 452 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SP100P23497 879 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 IL4RP24394 825 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ADRA1DP25100 572 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TACR3P29371 465 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TYK2P29597 1187 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MIPP30301 263 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 UQCRC1P31930 480 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SPRP35270 261 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CPOXP36551 454 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FDFT1P37268 417 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 GARSP41250 739 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CDKN2AP42771 156 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 GPD2P43304 727 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PSMC4P43686 418 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ATP5OP48047 213 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC1A6P48664 564 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 HCAR3P49019 387 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 HARS2P49590 506 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 VPS41P49754 854 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC26A2P50443 739 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NEK3P51956 506 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF132P52740 706 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NR1H2P55055 460 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 WNT3P56703 355 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 BACE1P56817 501 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ACTR2P61160 394 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 UBXN2AP68543 259 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RBP5P82980 135 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PDE1BQ01064 536 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TNFAIP2Q03169 654 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FOLH1Q04609 750 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 BST1Q10588 318 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ILF2Q12905 390 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LMAN2Q12907 356 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TRAP1Q12931 704 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 STX5Q13190 355 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PPIL2Q13356 520 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NAB1Q13506 487 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TNFAIP1Q13829 316 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CYLC2Q14093 348 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ARHGEF7Q14155 803 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RCN2Q14257 317 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FRG1Q14331 258 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MFSD13AQ14CX5 517 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TPSAB1Q15661 275 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZIK1Q3SY52 487 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 KBTBD12Q3ZCT8 623 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MINDY4Q4G0A6 757 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ANKRD20A4Q4UJ75 823 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LIN52Q52LA3 116 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LRRC23Q53EV4 343 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FASTKD1Q53R41 847 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF667Q5HYK9 610 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 C3orf38Q5JPI3 329 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ATAT1Q5SQI0 421 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM240Q5SV17 173 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FAXCQ5TGI0 409 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ARMC3Q5W041 872 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms