RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MAGEC3Q8TD91 643 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 KCTD4Q8WVF5 259 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 SKA2Q8WVK7 121 aaPredicted RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 ELF4Q99607 663 aaPredicted RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 NUSAP1Q9BXS6 441 aaKnown RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 TMEM168Q9H0V1 697 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 OR52A5Q9H2C5 316 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 OSGEPL1Q9H4B0 414 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 CAPN10Q9HC96 672 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 KCNK9Q9NPC2 374 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 IGSF5Q9NSI5 407 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 NKIRAS1Q9NYS0 192 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 GULP1Q9UBP9 304 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 FAM8A1Q9UBU6 413 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 SLC23A2Q9UGH3 650 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 GMEB2Q9UKD1 530 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 PCOLCE2Q9UKZ9 415 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 CDYLQ9Y232 598 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 DNAJC16Q9Y2G8 782 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 PCYT1BQ9Y5K3 369 aaPredicted RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 HEBP2Q9Y5Z4 205 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 CSNK1G3Q9Y6M4 447 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 ABCA7Q8IZY2 2146 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 SYCE1LA8MT33 242 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 PDZK1P1A8MUH7 402 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 BTN3A1O00481 513 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 TYROBPO43914 113 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 KDM1AO60341 852 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 CATP04040 527 aaKnown RBP12.96□□□□□ -0.33
SNX12-205ENST00000490561 RETP07949 1114 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 CYP2A7P20853 494 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 MPLP40238 635 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 ACTR1BP42025 376 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 PREPP48147 710 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 ACTR1AP61163 376 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 IRF9Q00978 393 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 TCF15Q12870 199 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 UAP1L1Q3KQV9 507 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 FAM83HQ6ZRV2 1179 aaPredicted RBP12.96□□□□□ -0.33
SNX12-205ENST00000490561 TAF8Q7Z7C8 310 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 PRSS33Q8NF86 280 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 STAG3L4Q8TBR4 150 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 RDH11Q8TC12 318 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 ANKRD49Q8WVL7 239 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 KIAA1191Q96A73 305 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 NXNL1Q96CM4 212 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 SCYL1Q96KG9 808 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 LRRC61Q9BV99 259 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 TRIM54Q9BYV2 358 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 CNOT10Q9H9A5 744 aaKnown RBP12.96□□□□□ -0.33
SNX12-205ENST00000490561 KCNK6Q9Y257 313 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 PLLPQ9Y342 182 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 SNX11Q9Y5W9 270 aa12.96□□□□□ -0.33
SNX12-205ENST00000490561 MUC3AQ02505 3323 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 BPTFQ12830 3046 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 NEMP2A6NFY4 417 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 ARHGAP33O14559 1287 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 KHNYNO15037 678 aaKnown RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 AQP9O43315 295 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 ZBTB14O43829 449 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 KERAO60938 352 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 SPAG7O75391 227 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 MATN4O95460 622 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 TFEBP19484 476 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 TAC1P20366 129 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 MAP4P27816 1152 aaKnown RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 NDUFS1P28331 727 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 PPP2R2AP63151 447 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 GRIK2Q13002 908 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 PRRT3Q5FWE3 981 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 CDKL4Q5MAI5 379 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 N4BP2L1Q5TBK1 243 aaPredicted RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 CAPRIN2Q6IMN6 1127 aaKnown RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 TTC23LQ6PF05 361 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 ABRAXAS1Q6UWZ7 409 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 NAPRTQ6XQN6 538 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 CYHR1Q6ZMK1 362 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 FRA10AC1Q70Z53 315 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 PIWIL4Q7Z3Z4 852 aaKnown RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 FBXO15Q8NCQ5 510 aaPredicted RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 LMX1AQ8TE12 382 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 SREK1Q8WXA9 508 aaKnown RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 ASB11Q8WXH4 323 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 ATOH1Q92858 354 aaPredicted RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 ZBTB9Q96C00 473 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 GPR78Q96P69 363 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 WWP1Q9H0M0 922 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 MRPL46Q9H2W6 279 aaKnown RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 TAAR2Q9P1P5 351 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 KLF15Q9UIH9 416 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 PNMA8BQ9ULN7 279 aaPredicted RBP12.95□□□□□ -0.34
SNX12-205ENST00000490561 DOLKQ9UPQ8 538 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 ZNF318Q5VUA4 2279 aa12.95□□□□□ -0.34
SNX12-205ENST00000490561 LRP4O75096 1905 aa12.94□□□□□ -0.34
SNX12-205ENST00000490561 KIR2DS5A0A0G2JLQ3 304 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms