RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 HSD17B4P51659 736 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 UBXN2AP68543 259 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 NR1D2Q14995 579 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 SFMBT2Q5VUG0 894 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 DENND5BQ6ZUT9 1274 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 TMEM173Q86WV6 379 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 SCML4Q8N228 414 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 L3MBTL4Q8NA19 623 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 AVL9Q8NBF6 648 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 GRAPLQ8TC17 118 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 PTPMT1Q8WUK0 201 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 ZNF622Q969S3 477 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 C17orf77Q96MU5 243 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 GCNAQ96QF7 691 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 KLHL4Q9C0H6 718 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 SLC35C2Q9NQQ7 365 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 NPAP1Q9NZP6 1156 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 TCF19Q9Y242 345 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 RABGAP1Q9Y3P9 1069 aa4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 MAGED1Q9Y5V3 778 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P38-201ENST00000490557 LOC102723996A0A087X1L8 192 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 TO15178 435 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 GRID2O43424 1007 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 XRCC3O43542 346 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 ABCB1P08183 1280 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 PAX1P15863 534 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 CALRP27797 417 aaKnown RBP4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 GABRA5P31644 462 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 CDK3Q00526 305 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 PRKAA1Q13131 559 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 BAATQ14032 418 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 TOMM20Q15388 145 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 SLC35E4Q6ICL7 350 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 CEACAM20Q6UY09 585 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 DGLUCYQ7Z3D6 616 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 STPG4Q8N801 248 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 POMGNT2Q8NAT1 580 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 PAPD5Q8NDF8 572 aaKnown RBP4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 ZFAND2BQ8WV99 257 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 TMCO6Q96DC7 493 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 PPIL3Q9H2H8 161 aaKnown RBP4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 MBNL1Q9NR56 388 aaKnown RBP4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 MORF4L1Q9UBU8 362 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 SLC7A7Q9UM01 511 aa4.57□□□□□ -1.68
HMGB1P38-201ENST00000490557 A0A0G2JLW4 131 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 TEX13DA0A0J9YY54 714 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 hCG_1809904A0A1W2PP81 198 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 A0A1W2PPE2 198 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 A0A1W2PR64 198 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 SYNDIG1LA6NDD5 238 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 CIDEAO60543 219 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 CBLP22681 906 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 PRPF4BQ13523 1007 aaKnown RBP4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 SNAPC1Q16533 368 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 TMEM211Q6ICI0 200 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 FIGLAQ6QHK4 219 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 Q6ZTC4 211 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 USP43Q70EL4 1123 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 ADGRA1Q86SQ6 560 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 CEP57Q86XR8 500 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 FAM114A1Q8IWE2 563 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 CRYBG2Q8N1P7 616 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 OR10V1Q8NGI7 309 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 OR2AJ1Q8NGZ0 328 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 EXD1Q8NHP7 514 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 FBXO17Q96EF6 278 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 NSL1Q96IY1 281 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 MS4A10Q96PG2 267 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 ABHD1Q96SE0 405 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 PSD2Q9BQI7 771 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 C16orf70Q9BSU1 422 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 TRAF4Q9BUZ4 470 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 ABHD6Q9BV23 337 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 TAB2Q9NYJ8 693 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 RHCGQ9UBD6 479 aa4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 GREB1LQ9C091 1923 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P38-201ENST00000490557 ASTN2O75129 1339 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 PASKQ96RG2 1323 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 A0A1W2PRB8 838 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 DUXAA6NLW8 204 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 OR6C76A6NM76 312 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 ERAL1O75616 437 aaKnown RBP4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 CREG1O75629 220 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 PGM3O95394 542 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 INHBAP08476 426 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 FGF5P12034 268 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 AKR1B1P15121 316 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 DNASE1P24855 282 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 THOP1P52888 689 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 IFI35P80217 286 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 WDR38Q5JTN6 314 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 PLA2G4FQ68DD2 849 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 ZNF329Q86UD4 541 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 DNAJC22Q8N4W6 341 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 KLHDC9Q8NEP7 349 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 TSPAN14Q8NG11 270 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 LMF2Q9BU23 707 aaKnown RBP4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 CCDC106Q9BWC9 280 aa4.55□□□□□ -1.68
HMGB1P38-201ENST00000490557 DPAGT1Q9H3H5 408 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms