RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CAPRIN2Q6IMN6 1127 aaKnown RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 PACS1Q6VY07 963 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 PRUNE1Q86TP1 453 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 PPP1R3BQ86XI6 285 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 KMT5CQ86Y97 462 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 ESX1Q8N693 406 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 LILRA3Q8N6C8 439 aaPredicted RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 CLDN19Q8N6F1 224 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 ACVR1CQ8NER5 493 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 OR6P1Q8NGX9 317 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 PEX13Q92968 403 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 HDAC10Q969S8 669 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 TSSK1BQ9BXA7 367 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 GPN2Q9H9Y4 310 aaPredicted RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 TCAF1Q9Y4C2 921 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 TMEM184BQ9Y519 407 aaPredicted RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 OR51F1A6NGY5 319 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 MATN2O00339 956 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 LIN7AO14910 233 aaPredicted RBP17.01■□□□□ 0.31
SEC13-218ENST00000490283 PRB1P04280 392 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 ZSCAN5DPP0CG00 497 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 LIFP15018 202 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 FOXN2P32314 431 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 GRIA1P42261 906 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 SH3BP2P78314 561 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 PLOD1Q02809 727 aaPredicted RBP17.01■□□□□ 0.31
SEC13-218ENST00000490283 ACY1Q03154 408 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 ABHD18Q0P651 414 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 FASTKD1Q53R41 847 aaKnown RBP17.01■□□□□ 0.31
SEC13-218ENST00000490283 CARFQ8N187 725 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 GLIS1Q8NBF1 620 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 OR13J1Q8NGT2 312 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 OR4L1Q8NH43 312 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 LCN9Q8WX39 176 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 ELMO1Q92556 727 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 SRMSQ9H3Y6 488 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 MVB12BQ9H7P6 319 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 GRPEL1Q9HAV7 217 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 BFARQ9NZS9 450 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 JRKLQ9Y4A0 524 aa17.01■□□□□ 0.31
SEC13-218ENST00000490283 ZNF891A8MT65 544 aaPredicted RBP17■□□□□ 0.31
SEC13-218ENST00000490283 MAP3K7O43318 606 aa17■□□□□ 0.31
SEC13-218ENST00000490283 GOT2P00505 430 aaKnown RBP17■□□□□ 0.31
SEC13-218ENST00000490283 SESN2P58004 480 aaPredicted RBP17■□□□□ 0.31
SEC13-218ENST00000490283 TUBB3Q13509 450 aa17■□□□□ 0.31
SEC13-218ENST00000490283 MAP7Q14244 749 aa17■□□□□ 0.31
SEC13-218ENST00000490283 PCID2Q5JVF3 399 aa17■□□□□ 0.31
SEC13-218ENST00000490283 TMTC4Q5T4D3 741 aa17■□□□□ 0.31
SEC13-218ENST00000490283 PCSK4Q6UW60 755 aa17■□□□□ 0.31
SEC13-218ENST00000490283 XKR5Q6UX68 686 aa17■□□□□ 0.31
SEC13-218ENST00000490283 OR4E2Q8NGC2 313 aa17■□□□□ 0.31
SEC13-218ENST00000490283 STAMBPL1Q96FJ0 436 aa17■□□□□ 0.31
SEC13-218ENST00000490283 ELMO2Q96JJ3 720 aa17■□□□□ 0.31
SEC13-218ENST00000490283 SLC41A2Q96JW4 573 aa17■□□□□ 0.31
SEC13-218ENST00000490283 NAP1L3Q99457 506 aaPredicted RBP17■□□□□ 0.31
SEC13-218ENST00000490283 MAP3K3Q99759 626 aa17■□□□□ 0.31
SEC13-218ENST00000490283 IL22Q9GZX6 179 aa17■□□□□ 0.31
SEC13-218ENST00000490283 OR52A5Q9H2C5 316 aa17■□□□□ 0.31
SEC13-218ENST00000490283 SOHLH2Q9NX45 425 aa17■□□□□ 0.31
SEC13-218ENST00000490283 SEMA5BQ9P283 1151 aa17■□□□□ 0.31
SEC13-218ENST00000490283 SLC2A6Q9UGQ3 507 aa17■□□□□ 0.31
SEC13-218ENST00000490283 LNPEPQ9UIQ6 1025 aa17■□□□□ 0.31
SEC13-218ENST00000490283 RARRES3Q9UL19 164 aa17■□□□□ 0.31
SEC13-218ENST00000490283 BPTFQ12830 3046 aa17■□□□□ 0.31
SEC13-218ENST00000490283 IGHV5-51A0A0C4DH38 117 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 GSAPA4D1B5 854 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 ZBTB11O95625 1053 aaPredicted RBP16.99■□□□□ 0.31
SEC13-218ENST00000490283 DLGAP3O95886 979 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 MT-ND3P03897 115 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 FGF5P12034 268 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 KCNJ1P48048 391 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 PREPP48147 710 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 PPP1CAP62136 330 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 HSD11B2P80365 405 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 SARNPP82979 210 aaKnown RBP16.99■□□□□ 0.31
SEC13-218ENST00000490283 CDK16Q00536 496 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 MC1RQ01726 317 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 BOP1Q14137 746 aaKnown RBP16.99■□□□□ 0.31
SEC13-218ENST00000490283 LY6DQ14210 128 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
SEC13-218ENST00000490283 C6orf15Q6UXA7 325 aaPredicted RBP16.99■□□□□ 0.31
SEC13-218ENST00000490283 BPHLQ86WA6 291 aaPredicted RBP16.99■□□□□ 0.31
SEC13-218ENST00000490283 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
SEC13-218ENST00000490283 TFGQ92734 400 aaPredicted RBP16.99■□□□□ 0.31
SEC13-218ENST00000490283 MED8Q96G25 268 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 PBKQ96KB5 322 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 SPRY4Q9C004 299 aa16.99■□□□□ 0.31
SEC13-218ENST00000490283 ATRXP46100 2492 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 SDK2Q58EX2 2172 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 ZSCAN12O43309 604 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 KDM1AO60341 852 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 KIAA0754O94854 1291 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 CCNYL3P0C7X3 344 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 POLR2CP19387 275 aaPredicted RBP16.98■□□□□ 0.31
SEC13-218ENST00000490283 CDH3P22223 829 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 PDHA2P29803 388 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 NPY2RP49146 381 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 ACVR1Q04771 509 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 BRD3Q15059 726 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms