RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 MLXIPLQ9NP71 852 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 SLAMF7Q9NQ25 335 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 C1GALT1Q9NS00 363 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 SPTLC3Q9NUV7 552 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 RSPH14Q9UHP6 348 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 CRLS1Q9UJA2 301 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 TRHDEQ9UKU6 1024 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 MAP4K5Q9Y4K4 846 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 LRRK2Q5S007 2527 aa9.12□□□□□ -0.95
SNX17-207ENST00000489402 USP9YO00507 2555 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 GSAPA4D1B5 854 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 SLC9B1P1A6NJY1 282 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 HACD1B0YJ81 288 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 TMEM150CB9EJG8 249 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 CFAP99D6REC4 459 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 MEN1O00255 615 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 GAPDHSO14556 408 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 ANXA9O76027 345 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 SORBS2O94875 1100 aaKnown RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 POLBP06746 335 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 POLR2CP19387 275 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 PREPP48147 710 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 GEMP55040 296 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 LAMB3Q13751 1172 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 TAF1AQ15573 450 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 BCL7AQ4VC05 210 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 ITPRIPL1Q6GPH6 555 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 LCN10Q6JVE6 187 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 ZNF449Q6P9G9 518 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 MED25Q71SY5 747 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 CFAP206Q8IYR0 622 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 DSELQ8IZU8 1212 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 TMEM102Q8N9M5 508 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 SLC38A9Q8NBW4 561 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 ACVR1CQ8NER5 493 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 OR4E2Q8NGC2 313 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 OR4K2Q8NGD2 314 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 HM13Q8TCT9 377 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 LCN9Q8WX39 176 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 ULK4Q96C45 1275 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 HAUS1Q96CS2 278 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 LINC00615Q96LM1 132 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 RMDN2Q96LZ7 410 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 QKIQ96PU8 341 aaKnown RBP eCLIP9.11□□□□□ -0.959e-9■■□□□ 14.4
SNX17-207ENST00000489402 FICDQ9BVA6 458 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 GBA3Q9H227 469 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 SRMSQ9H3Y6 488 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 GOLPH3Q9H4A6 298 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 ASB8Q9H765 288 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 ACTR5Q9H9F9 607 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 NHEJ1Q9H9Q4 299 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 ABHD10Q9NUJ1 306 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 CUEDC1Q9NWM3 386 aaPredicted RBP9.11□□□□□ -0.95
SNX17-207ENST00000489402 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 SERTAD3Q9UJW9 196 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 POMT2Q9UKY4 750 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 TCFL5Q9UL49 500 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 INTUQ9ULD6 942 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 TFR2Q9UP52 801 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 PADI2Q9Y2J8 665 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 ARL5AQ9Y689 179 aa9.11□□□□□ -0.95
SNX17-207ENST00000489402 CRYBG3Q68DQ2 2970 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 hCG_1818297A0A087WSY0 165 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 C5orf60A6NFR6 353 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 C9J4A7 227 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 H7C0C1 242 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 IFRD1O00458 451 aaPredicted RBP9.1□□□□□ -0.95
SNX17-207ENST00000489402 CEACAM4O75871 244 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 SRP72O76094 671 aaKnown RBP9.1□□□□□ -0.95
SNX17-207ENST00000489402 ZRANB2O95218 330 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNX17-207ENST00000489402 CRTAMO95727 393 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 MSL3P1P0C860 447 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 RNF224P0DH78 156 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 PYGBP11216 843 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 ITGALP20701 1170 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 AGXTP21549 392 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 ATP5OP48047 213 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 PRLHRP49683 370 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 VAV2P52735 878 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 ABRQ12979 859 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 OLIG2Q13516 323 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 PRPSAP1Q14558 356 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 TCEAL1Q15170 157 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 INPP5JQ15735 1006 aaPredicted RBP9.1□□□□□ -0.95
SNX17-207ENST00000489402 TAZQ16635 292 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 PLEKHS1Q5SXH7 462 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 CCDC181Q5TID7 509 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 PRAMEF17Q5VTA0 474 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 JMJD6Q6NYC1 403 aaPredicted RBP9.1□□□□□ -0.95
SNX17-207ENST00000489402 RAB43Q86YS6 212 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 TMEM151BQ8IW70 566 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 SYTL1Q8IYJ3 562 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 RCOR2Q8IZ40 523 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 ADAMTS17Q8TE56 1095 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 HEXDCQ8WVB3 486 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 N4BP2L2Q92802 583 aaPredicted RBP9.1□□□□□ -0.95
SNX17-207ENST00000489402 LRRC45Q96CN5 670 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 RBM41Q96IZ5 413 aaKnown RBP9.1□□□□□ -0.95
SNX17-207ENST00000489402 FERD3LQ96RJ6 166 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 DPH2Q9BQC3 489 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms