RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ARL2BPQ9Y2Y0 163 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 PRKAB1Q9Y478 270 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 TNPO3Q9Y5L0 923 aaKnown RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 DNMT3AQ9Y6K1 912 aaPredicted RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 PLXNA2O75051 1894 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 EYSQ5T1H1 3165 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 IGHV1OR15-9A0A0B4J2B8 117 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 A0A0G2JND7 137 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 PRAMEF26H0Y7S4 382 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 TOR1BO14657 336 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 FFAR2O15552 330 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 KLK8O60259 260 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 GUCA1CO95843 209 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 HOXC4P09017 264 aaPredicted RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 KITP10721 976 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 MPSTP25325 297 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 CXCL12P48061 93 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 PXNP49023 591 aaPredicted RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 AP1S2P56377 157 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ARHGAP8P85298 464 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 SIGLEC14Q08ET2 396 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ABRQ12979 859 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 RPA4Q13156 261 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 NFATC4Q14934 902 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 SETDB1Q15047 1291 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 PHKG1Q16816 387 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ARL13AQ5H913 290 aaPredicted RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 CDKL4Q5MAI5 379 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ZNF678Q5SXM1 525 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ANKS6Q68DC2 871 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 SULT1C3Q6IMI6 304 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 CGB2Q6NT52 195 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 CYHR1Q6ZMK1 362 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 PIGWQ7Z7B1 504 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 WDR75Q8IWA0 830 aaKnown RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 OXR1Q8N573 874 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 PDPRQ8NCN5 879 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 CFAP61Q8NHU2 1237 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 PIWIL2Q8TC59 973 aaKnown RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 RLN3Q8WXF3 142 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ASB11Q8WXH4 323 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 WDR92Q96MX6 357 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 SORT1Q99523 831 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 SIKE1Q9BRV8 207 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 SLC12A9Q9BXP2 914 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 PCED1AQ9H1Q7 454 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ZNF395Q9H8N7 513 aaPredicted RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 RDH14Q9HBH5 336 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ACSS2Q9NR19 701 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 ARL15Q9NXU5 204 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 EIF2B4Q9UI10 523 aaKnown RBP9.81□□□□□ -0.84
USP11-211ENST00000489111 DCTN4Q9UJW0 460 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 CDYLQ9Y232 598 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 SLC17A4Q9Y2C5 497 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 RAP2CQ9Y3L5 183 aa9.81□□□□□ -0.84
USP11-211ENST00000489111 POM121BA6NF01 834 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 MEI4A8MW99 385 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 IFRD1O00458 451 aaPredicted RBP9.8□□□□□ -0.84
USP11-211ENST00000489111 EBAG9O00559 213 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 GIPC1O14908 333 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 AXIN1O15169 862 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 SIX3O95343 332 aaPredicted RBP9.8□□□□□ -0.84
USP11-211ENST00000489111 RPN2P04844 631 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 IGHV4-34P06331 123 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 CEACAM5P06731 702 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 CHRNGP07510 517 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 RPS17P08708 135 aaKnown RBP9.8□□□□□ -0.84
USP11-211ENST00000489111 ANXA5P08758 320 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 SLC35G4P0C7Q5 338 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 ACP5P13686 325 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 CCR10P46092 362 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 GNPDA1P46926 289 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 RABIFP47224 123 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 RPIAP49247 311 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 AGTR2P50052 363 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 HK2P52789 917 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 HK3P52790 923 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 YPEL5P62699 121 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 CDKL1Q00532 357 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 LCP2Q13094 533 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 NFE2L1Q14494 772 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 RBBP7Q16576 425 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 ZNF658BQ4V348 819 aaPredicted RBP9.8□□□□□ -0.84
USP11-211ENST00000489111 USP39Q53GS9 565 aaKnown RBP9.8□□□□□ -0.84
USP11-211ENST00000489111 UNC50Q53HI1 259 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 SH2D4BQ5SQS7 431 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 GCNT7Q6ZNI0 430 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 C11orf96Q7Z7L8 435 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 PDZD3Q86UT5 571 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 TCAIMQ8N3R3 496 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
USP11-211ENST00000489111 LILRA3Q8N6C8 439 aaPredicted RBP9.8□□□□□ -0.84
USP11-211ENST00000489111 ZNF781Q8N8C0 355 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 OR56A4Q8NGH8 313 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 RFWD2Q8NHY2 731 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 AGR3Q8TD06 166 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 UBTD2Q8WUN7 234 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 BIRC7Q96CA5 298 aa9.8□□□□□ -0.84
USP11-211ENST00000489111 FAR2Q96K12 515 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms