RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 KIAA1614Q5VZ46 1190 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 DUS1LQ6P1R4 473 aaKnown RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 TTC23LQ6PF05 361 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 DRICH1Q6PGQ1 229 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 PRSS42Q7Z5A4 293 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 PPP1R3BQ86XI6 285 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 KLHDC8BQ8IXV7 354 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ESX1Q8N693 406 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 CLDN19Q8N6F1 224 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ACVR1CQ8NER5 493 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 GPR150Q8NGU9 434 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 SKA2Q8WVK7 121 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 HDAC10Q969S8 669 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 MAGOHBQ96A72 148 aaKnown RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 RMDN2Q96LZ7 410 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 RANBP9Q96S59 729 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 INSM2Q96T92 566 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 CD180Q99467 661 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 TLR10Q9BXR5 811 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 SLC7A5P2Q9GIP4 190 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ZNF768Q9H5H4 540 aaKnown RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 KIR3DX1Q9H7L2 352 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 MVB12BQ9H7P6 319 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 COG4Q9H9E3 785 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 EIF2B3Q9NR50 452 aaKnown RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 CATSPERZQ9NTU4 200 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 SLC24A2Q9UI40 661 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 RARRES3Q9UL19 164 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ASF1AQ9Y294 204 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 TCAF1Q9Y4C2 921 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ADAMTS20P59510 1910 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 SPTA1P02549 2419 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ARHGEF17Q96PE2 2063 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 PRR19A6NJB7 356 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 ZNF891A8MT65 544 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 AGAP14A8MT82 685 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 KIF1CO43896 1103 aaKnown RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 GOT2P00505 430 aaKnown RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 MT-ND3P03897 115 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 APOA4P06727 396 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 ZSCAN5DPP0CG00 497 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 POLR2CP19387 275 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 KCNJ1P48048 391 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 PREPP48147 710 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 CD151P48509 253 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 NPY2RP49146 381 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 TTPAP49638 278 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 CDKN1CP49918 316 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 CSE1LP55060 971 aaKnown RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 HSD11B2P80365 405 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 CDK16Q00536 496 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 GPS1Q13098 491 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 TRIP13Q15645 432 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 PTRHD1Q6GMV3 140 aaKnown RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 MRNIPQ6NTE8 343 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 C6orf15Q6UXA7 325 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 PRUNE1Q86TP1 453 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 KMT5CQ86Y97 462 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 SPDYE1Q8NFV5 336 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 OR4E2Q8NGC2 313 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 PMEPA1Q969W9 287 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 HGH1Q9BTY7 390 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 RAB33BQ9H082 229 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 CASS4Q9NQ75 786 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 IRAK4Q9NWZ3 460 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 OGFRQ9NZT2 677 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 EPHA6Q9UF33 1036 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 RIMKLBQ9ULI2 386 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 TTC7AQ9ULT0 858 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 TDRKHQ9Y2W6 561 aaKnown RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 PCDHB3Q9Y5E6 796 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
HDAC6-232ENST00000489053 HEMK1Q9Y5R4 338 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 GCN1Q92616 2671 aaKnown RBP8.9□□□□□ -0.98
HDAC6-232ENST00000489053 FASNP49327 2511 aaKnown RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 SMG1Q96Q15 3661 aaKnown RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 IGLV3-16A0A075B6K0 115 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 TRBV5-4A0A0C4DH59 114 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 OR51F1A6NGY5 319 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 C2orf74A8MZ97 194 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 CD3EAPO15446 510 aaKnown RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 KIAA0754O94854 1291 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 ZBTB11O95625 1053 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 KRT14P02533 472 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 ITGB2P05107 769 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PRSS56P0CW18 603 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 SFTPCP11686 197 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 LIFP15018 202 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 NELFEP18615 380 aaKnown RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 CA5AP35218 305 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 GRIA1P42261 906 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 ARCN1P48444 511 aaKnown RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 ARSDP51689 593 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 SH3BP2P78314 561 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PRKG2Q13237 762 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PPP1R7Q15435 360 aa8.89□□□□□ -0.99
HDAC6-232ENST00000489053 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 RNF187Q5TA31 235 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-232ENST00000489053 PACS1Q6VY07 963 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms