RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 FAM3CQ92520 227 aa13.1□□□□□ -0.31
CHD1L-208ENST00000488864 TFAP2CQ92754 450 aa13.1□□□□□ -0.31
CHD1L-208ENST00000488864 NXNL1Q96CM4 212 aa13.1□□□□□ -0.31
CHD1L-208ENST00000488864 GPR22Q99680 433 aa13.1□□□□□ -0.31
CHD1L-208ENST00000488864 INIPQ9NRY2 104 aa13.1□□□□□ -0.31
CHD1L-208ENST00000488864 CD300AQ9UGN4 299 aa13.1□□□□□ -0.31
CHD1L-208ENST00000488864 MID2Q9UJV3 735 aa13.1□□□□□ -0.31
CHD1L-208ENST00000488864 EDDM13A0A1B0GTR0 161 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 SAC3D1A6NKF1 404 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PLK4O00444 970 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 KPNA3O00505 521 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 DLGAP1O14490 977 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 HNRNPLP14866 589 aaKnown RBP eCLIP13.09□□□□□ -0.314e-10■■□□□ 14.2
CHD1L-208ENST00000488864 FUT4P22083 530 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 SLC14A2Q15849 920 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PPP1R3AQ16821 1122 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 ZBED5Q49AG3 693 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PCID2Q5JVF3 399 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 ZNF786Q8N393 782 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PPHLN1Q8NEY8 458 aaKnown RBP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 CPEB1Q9BZB8 566 aaKnown RBP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 TNFRSF12AQ9NP84 129 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 CCDC167Q9P0B6 97 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 ANKRD6Q9Y2G4 727 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 FNDC3AQ9Y2H6 1198 aaKnown RBP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 TCAF1Q9Y4C2 921 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 AP3B1O00203 1094 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 SOCS5O75159 536 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 TNFRSF4P43489 277 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 AGKQ53H12 422 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PPP4R4Q6NUP7 873 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 PKN3Q6P5Z2 889 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 LYSMD3Q7Z3D4 306 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 GLT6D1Q7Z4J2 308 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 CEP97Q8IW35 865 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 IL17RCQ8NAC3 791 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 TXNDC5Q8NBS9 432 aaKnown RBP13.09□□□□□ -0.31
CHD1L-208ENST00000488864 TRPC4APQ8TEL6 797 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 GPR78Q96P69 363 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 SLC39A3Q9BRY0 314 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 SLC2A4RGQ9NR83 387 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 SMOXQ9NWM0 555 aa13.09□□□□□ -0.31
CHD1L-208ENST00000488864 COL4A2P08572 1712 aa13.08□□□□□ -0.31
CHD1L-208ENST00000488864 KANSL1LA0AUZ9 987 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 NEMP2A6NFY4 417 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 TRIM64CA6NLI5 447 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 AKAP10O43572 662 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 LDB2O43679 373 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 UGT1A6P19224 532 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 CD247P20963 164 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 PRKAA2P54646 552 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 TRAP1Q12931 704 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 FASTKQ14296 549 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 FRG1Q14331 258 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 ELAVL3Q14576 367 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 KIAA1211LQ6NV74 962 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 PNPLA1Q8N8W4 532 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 ANKFN1Q8N957 763 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 OR13C4Q8NGS5 318 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 CANT1Q8WVQ1 401 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 STON2Q8WXE9 905 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 DUS3LQ96G46 650 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 TSNARE1Q96NA8 513 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 KIFC1Q9BW19 673 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 PAIP1Q9H074 479 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 BPIFA1Q9NP55 256 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 FAM149AA5PLN7 773 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 KLF8O95600 359 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 AHSGP02765 367 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 DRD1P21728 446 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 HNF1BP35680 557 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 ESRRGP62508 458 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 TTC33Q6PID6 262 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 TSPAN33Q86UF1 283 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 CBR4Q8N4T8 237 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 BRSK1Q8TDC3 778 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 OR8D1Q8WZ84 308 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 ECHDC3Q96DC8 303 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 ZNF641Q96N77 438 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 NPLQ9BXD5 320 aaPredicted RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
CHD1L-208ENST00000488864 PFDN4Q9NQP4 134 aa13.08□□□□□ -0.32
CHD1L-208ENST00000488864 A0A087WXM4 84 aa13.07□□□□□ -0.32
CHD1L-208ENST00000488864 A0A0J9YYE9 177 aa13.07□□□□□ -0.32
CHD1L-208ENST00000488864 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-208ENST00000488864 ADAM23O75077 832 aa13.07□□□□□ -0.32
CHD1L-208ENST00000488864 CLIC3O95833 236 aa13.07□□□□□ -0.32
CHD1L-208ENST00000488864 TRBC1P01850 177 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms