RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 KLK13Q9UKR3 277 aa3.41□□□□□ -1.86
CCDC66-221ENST00000487739 A0A1W2PRB8 838 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.4□□□□□ -1.87
CCDC66-221ENST00000487739 KLF11O14901 512 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 PI15O43692 258 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 PIGNO95427 931 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 CCR9P51686 369 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 EIF4A2Q14240 407 aaKnown RBP3.4□□□□□ -1.87
CCDC66-221ENST00000487739 ZRSR2Q15696 482 aaKnown RBP3.4□□□□□ -1.87
CCDC66-221ENST00000487739 TBCEQ15813 527 aaPredicted RBP3.4□□□□□ -1.87
CCDC66-221ENST00000487739 DCAF10Q5QP82 559 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 GCNT6Q5T4J0 391 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 ZNF774Q6NX45 483 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 NCEH1Q6PIU2 408 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 LRRTM1Q86UE6 522 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 SMAP1Q8IYB5 467 aaPredicted RBP3.4□□□□□ -1.87
CCDC66-221ENST00000487739 HPSE2Q8WWQ2 592 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 ELMOD3Q96FG2 381 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 SGK494Q96LW2 274 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 SLC22A12Q96S37 553 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 DDOQ99489 341 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 NCAPGQ9BPX3 1015 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 HGH1Q9BTY7 390 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 PITPNM3Q9BZ71 974 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 ACKR4Q9NPB9 350 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 FAM120CQ9NX05 1096 aaKnown RBP3.4□□□□□ -1.87
CCDC66-221ENST00000487739 TP53TG3Q9ULZ0 132 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
CCDC66-221ENST00000487739 SPIN1Q9Y657 262 aaPredicted RBP3.4□□□□□ -1.87
CCDC66-221ENST00000487739 A0A1W2PN81 502 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 ELOVL7A1L3X0 281 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 NDUFS4O43181 175 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 KHDRBS3O75525 346 aaKnown RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 DUS4LO95620 317 aaKnown RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 GH2P01242 217 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 HSPA1AP0DMV8 641 aaKnown RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 HSPA1BP0DMV9 641 aaKnown RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 CDH2P19022 906 aaPredicted RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 EFNA1P20827 205 aaPredicted RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 CHRNA7P36544 502 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 RPS3AP61247 264 aaKnown RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 PLA2G7Q13093 441 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 C2CD6Q53TS8 623 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 RARS2Q5T160 578 aaKnown RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 PAQR6Q6TCH4 344 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 LMNTD2Q8IXW0 634 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 DYRK2Q92630 601 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 DACH2Q96NX9 599 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 FOXN4Q96NZ1 517 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 TRAF4Q9BUZ4 470 aaPredicted RBP3.39□□□□□ -1.87
CCDC66-221ENST00000487739 SETD4Q9NVD3 440 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 LRWD1Q9UFC0 647 aa3.39□□□□□ -1.87
CCDC66-221ENST00000487739 KPNA7A9QM74 516 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 UGT1A4P22310 534 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 NKX2-1P43699 371 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-221ENST00000487739 PRKCZQ05513 592 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 GRAPQ13588 217 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 MED22Q15528 200 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 GLIPR1L2Q4G1C9 344 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 TMEM198Q66K66 360 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 IL27RAQ6UWB1 636 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 CPLX4Q7Z7G2 160 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 PIGZQ86VD9 579 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 CPSF7Q8N684 471 aaKnown RBP3.38□□□□□ -1.87
CCDC66-221ENST00000487739 KCNG4Q8TDN1 519 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 NSMCE3Q96MG7 304 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 GAD1Q99259 594 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 GPATCH1Q9BRR8 931 aaKnown RBP3.38□□□□□ -1.87
CCDC66-221ENST00000487739 FUCA2Q9BTY2 467 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 ABHD6Q9BV23 337 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 HHATLQ9HCP6 504 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 ERAP1Q9NZ08 941 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 PNMA2Q9UL42 364 aa3.38□□□□□ -1.87
CCDC66-221ENST00000487739 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.38□□□□□ -1.87
CCDC66-221ENST00000487739 PCNX3Q9H6A9 2034 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 PRKRAO75569 313 aaKnown RBP3.37□□□□□ -1.87
CCDC66-221ENST00000487739 NXPH2O95156 264 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 SRPRAP08240 638 aaKnown RBP3.37□□□□□ -1.87
CCDC66-221ENST00000487739 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
CCDC66-221ENST00000487739 SNRPEP62304 92 aaKnown RBP3.37□□□□□ -1.87
CCDC66-221ENST00000487739 RAPSNQ13702 412 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 HLA-BQ31612 363 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 SARM1Q6SZW1 724 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 LINGO4Q6UY18 593 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 CFAP77Q6ZQR2 320 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 ARID3BQ8IVW6 561 aaPredicted RBP3.37□□□□□ -1.87
CCDC66-221ENST00000487739 MARVELD2Q8N4S9 558 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 KBTBD8Q8NFY9 601 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 OR5AP2Q8NGF4 316 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 OR4C3Q8NH37 302 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 POMGNT1Q8WZA1 660 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 MTERF3Q96E29 417 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 OMA1Q96E52 524 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 OR2A14Q96R47 310 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 KRT12Q99456 494 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 LRRC61Q9BV99 259 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 PLK3Q9H4B4 646 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 DNAJC18Q9H819 358 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 PRR34Q9NV39 138 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 NPAP1Q9NZP6 1156 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms