RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CLYBLQ8N0X4 340 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 OR56A4Q8NGH8 313 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 LINC00615Q96LM1 132 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ZNF382Q96SR6 550 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 CDX2Q99626 313 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 TUBB6Q9BUF5 446 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 C1QTNF2Q9BXJ5 285 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 OR2AG1Q9H205 316 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 FZD4Q9ULV1 537 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 DNAJC15Q9Y5T4 150 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ST14Q9Y5Y6 855 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 CHUKO15111 745 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 VEGFDO43915 354 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 GUCA1CO95843 209 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 PRDX3P30048 256 aaKnown RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 GGT5P36269 586 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ADPRHP54922 357 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 CDK3Q00526 305 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 SKIV2LQ15477 1246 aaKnown RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 LEXMQ3ZCV2 418 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 KIAA1161Q6NSJ0 714 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 MBOAT1Q6ZNC8 495 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 USP30Q70CQ3 517 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 UBE2R2Q712K3 238 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 GOLGA7Q7Z5G4 137 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 SYVN1Q86TM6 617 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 HEATR4Q86WZ0 1026 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 SLC22A15Q8IZD6 547 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 LILRA3Q8N6C8 439 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 TP53I13Q8NBR0 393 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 RPLP0P6Q8NHW5 317 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ACTRT2Q8TDY3 377 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 HLA-CQ95604 372 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 KLHL29Q96CT2 875 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 NSL1Q96IY1 281 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ZNF514Q96K75 400 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 PPP1R36Q96LQ0 422 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 LENG8Q96PV6 779 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-211ENST00000487698 KCNA7Q96RP8 456 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 HGH1Q9BTY7 390 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 PARVBQ9HBI1 364 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 ARHGEF3Q9NR81 526 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 GPR34Q9UPC5 381 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 FIS1Q9Y3D6 152 aa9.25□□□□□ -0.93
SF3B1-211ENST00000487698 CFAP73A6NFT4 308 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 OR7A17O14581 309 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 PSIP1O75475 530 aaKnown RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 PCCBP05166 539 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 ZNF8P17098 575 aaPredicted RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 CALB2P22676 271 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TRIM23P36406 574 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 HSPA7P48741 367 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 RPIAP49247 311 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 PKNOX1P55347 436 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 RPS21P63220 83 aaKnown RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TRAF3Q13114 568 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TDGQ13569 410 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 GTF2H2Q13888 395 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 IRF4Q15306 451 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 ZXDCQ2QGD7 858 aaPredicted RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 MAP7D1Q3KQU3 841 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TTC31Q49AM3 519 aaPredicted RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 SYTL3Q4VX76 610 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 SLC44A4Q53GD3 710 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 EOGTQ5NDL2 527 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 GTF2H2CQ6P1K8 395 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM92Q6UXU6 159 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 GPRIN3Q6ZVF9 776 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 CHSY3Q70JA7 882 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 C11orf96Q7Z7L8 435 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 CPSF7Q8N684 471 aaKnown RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 OR52B6Q8NGF0 335 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 CEP70Q8NHQ1 597 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 FAM3CQ92520 227 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM159Q96B96 161 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 MRGPRX1Q96LB2 322 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 EGFL8Q99944 293 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 NUSAP1Q9BXS6 441 aaKnown RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TEX101Q9BY14 249 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 CD244Q9BZW8 370 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 TUBB1Q9H4B7 451 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 PREBQ9HCU5 417 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 MBNL1Q9NR56 388 aaKnown RBP9.24□□□□□ -0.93
SF3B1-211ENST00000487698 MMP17Q9ULZ9 603 aa9.24□□□□□ -0.93
SF3B1-211ENST00000487698 C17orf113A0A1B0GUU1 675 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 LIN7AO14910 233 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 SLC22A2O15244 555 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 DCXO43602 365 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 ENO1P06733 434 aaKnown RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 ANXA5P08758 320 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 NCF2P19878 526 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PREPP48147 710 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 AP1S2P56377 157 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 CDC16Q13042 620 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 GTF2H3Q13889 308 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 RBBP7Q16576 425 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TTC23LQ6PF05 361 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 Q7L0L9 218 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 KBTBD6Q86V97 674 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TRAPPC5Q8IUR0 188 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms