RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PTPRCAPQ14761 206 aa18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 SLC1A5Q15758 541 aa18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 SLC18A3Q16572 532 aa18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 OXNAD1Q96HP4 312 aaPredicted RBP18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 SYTL2Q9HCH5 934 aa18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 SAE1Q9UBE0 346 aaPredicted RBP18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 COLEC10Q9Y6Z7 277 aa18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 ITPR2Q14571 2701 aa18.89■□□□□ 0.62
SMPDL3A-202ENST00000487215 CBX6O95503 412 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 PRAMEF1O95521 474 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 CYP2A7P20853 494 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 NDUFS1P28331 727 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 TNNT3P45378 269 aaPredicted RBP18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 PREPP48147 710 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 UBASH3AP57075 661 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 GSE1Q14687 1217 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 PLEKHN1Q494U1 663 aaPredicted RBP18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 BCL7AQ4VC05 210 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 VWA5B1Q5TIE3 1220 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 IQCKQ8N0W5 287 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 LILRA3Q8N6C8 439 aaPredicted RBP18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 IPMKQ8NFU5 416 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 SLC35G2Q8TBE7 412 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 ZNF398Q8TD17 642 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 TFB1MQ8WVM0 346 aaKnown RBP18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 SGSM3Q96HU1 749 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 ASF1BQ9NVP2 202 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 C5AR2Q9P296 337 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 DOPEY1Q5JWR5 2465 aa18.89■□□□□ 0.61
SMPDL3A-202ENST00000487215 GSAPA4D1B5 854 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 KLHL33A6NCF5 533 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 MATN2O00339 956 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 SGTAO43765 313 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 POLBP06746 335 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 MSL3P1P0C860 447 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 ST6GAL1P15907 406 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 PECAM1P16284 738 aaPredicted RBP18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 NR2C2P49116 596 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 LMAN1P49257 510 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 ADCY2Q08462 1091 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 KRT33BQ14525 404 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 KYNUQ16719 465 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 LRRC38Q5VT99 294 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 MFSD7Q6UXD7 560 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 DAAM2Q86T65 1068 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 RAB43Q86YS6 212 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 ACVR1CQ8NER5 493 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 LINC00615Q96LM1 132 aaPredicted RBP18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 FCRL5Q96RD9 977 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 KLHL8Q9P2G9 620 aaPredicted RBP18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 HIVEP3Q5T1R4 2406 aa18.88■□□□□ 0.61
SMPDL3A-202ENST00000487215 C9J4A7 227 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 STX7O15400 261 aaKnown RBP18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 PRDX3P30048 256 aaKnown RBP18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 HNRNPH3P31942 346 aaKnown RBP18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 OTX2P32243 289 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 ARHGAP25P42331 645 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 ASTE1Q2TB18 679 aaPredicted RBP18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 ODF2Q5BJF6 829 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 ZNF385CQ66K41 422 aaPredicted RBP18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 BZW1Q7L1Q6 419 aaKnown RBP18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 MRGPREQ86SM8 312 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 CFAP206Q8IYR0 622 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 ZNF567Q8N184 647 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 CISD2Q8N5K1 135 aaKnown RBP18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 LCN9Q8WX39 176 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 NRTNQ99748 197 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 PITPNM3Q9BZ71 974 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 SLC7A5P2Q9GIP4 190 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 SRMSQ9H3Y6 488 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 SERTAD3Q9UJW9 196 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 SLC5A6Q9Y289 635 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 B3GNT3Q9Y2A9 372 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 PADI2Q9Y2J8 665 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 HEBP2Q9Y5Z4 205 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 ARL5AQ9Y689 179 aa18.87■□□□□ 0.61
SMPDL3A-202ENST00000487215 PRRC2CQ9Y520 2896 aaKnown RBP18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 E7EQ34 232 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 BTN3A3O00478 584 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 BTN3A1O00481 513 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 ZNF749O43361 778 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 PYGMP11217 842 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 TNNT1P13805 278 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 MPP3Q13368 585 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 ZRANB3Q5FWF4 1079 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 PID1Q7Z2X4 250 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 LUZP1Q86V48 1076 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 HM13Q8TCT9 377 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 C5orf34Q96MH7 638 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 RANBP9Q96S59 729 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 DPH2Q9BQC3 489 aaPredicted RBP18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 CCM2Q9BSQ5 444 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 DHRS4Q9BTZ2 278 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 KLHL25Q9H0H3 589 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 ASB8Q9H765 288 aa18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 DDX56Q9NY93 547 aaKnown RBP18.86■□□□□ 0.61
SMPDL3A-202ENST00000487215 CREBBPQ92793 2442 aa18.85■□□□□ 0.61
SMPDL3A-202ENST00000487215 GOLGA6L19H0YKK7 550 aa18.85■□□□□ 0.61
SMPDL3A-202ENST00000487215 CST8O60676 142 aa18.85■□□□□ 0.61
SMPDL3A-202ENST00000487215 KLF7O75840 302 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms