RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 KPNA5O15131 536 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 SEC31AO94979 1220 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 TNFSF15O95150 251 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 C9P02748 559 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 ANKRD34CP0C6C1 535 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 CSTF2P33240 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 CKAP4Q07065 602 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 THOC5Q13769 683 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 BOP1Q14137 746 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 KRT33BQ14525 404 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 C16orf72Q14CZ0 275 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 PLCL1Q15111 1095 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 TMED2Q15363 201 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 LONRF1Q17RB8 773 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 PTRHD1Q6GMV3 140 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 HIBCHQ6NVY1 386 aaPredicted RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 FOXR1Q6PIV2 292 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 CLEC14AQ86T13 490 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 LDB1Q86U70 411 aaPredicted RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 ACVR1CQ8NER5 493 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 ASZ1Q8WWH4 475 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 LRRC39Q96DD0 335 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 ZDHHC12Q96GR4 267 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 PRR11Q96HE9 360 aaPredicted RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 EBNA1BP2Q99848 306 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 TRIM51Q9BSJ1 452 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 INTS10Q9NVR2 710 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 SLC24A2Q9UI40 661 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 CFAP20Q9Y6A4 193 aaKnown RBP12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 FAM169AQ9Y6X4 670 aa12.34□□□□□ -0.43
ECHDC2-213ENST00000487040 ZZEF1O43149 2961 aa12.33□□□□□ -0.43
ECHDC2-213ENST00000487040 ASPMQ8IZT6 3477 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 PRAMEF33A0A0G2JMD5 474 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 CDRT15L2A8MXV6 281 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 TAF4O00268 1085 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 KDM1AO60341 852 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 ESR1P03372 595 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 APOA4P06727 396 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 TYRP1P17643 537 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 PDHA2P29803 388 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 PREPP48147 710 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 ITGA8P53708 1063 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 EIF3BP55884 814 aaKnown RBP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 ARL4CP56559 192 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 PCBP4P57723 403 aaKnown RBP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 DHX9Q08211 1270 aaKnown RBP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 HIF1AQ16665 826 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 TMEM164Q5U3C3 297 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 ZNF470Q6ECI4 717 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 DUS1LQ6P1R4 473 aaKnown RBP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 ARHGAP22Q7Z5H3 698 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 OOSP2Q86WS3 158 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 CILP2Q8IUL8 1156 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 AGGF1Q8N302 714 aaeCLIP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 LPGAT1Q92604 370 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 TFGQ92734 400 aaPredicted RBP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 FCRL3Q96P31 734 aaPredicted RBP12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 FAM167BQ9BTA0 163 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 PISDQ9UG56 409 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 CDC23Q9UJX2 597 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 APC2O95996 2303 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 PIKFYVEQ9Y2I7 2098 aa12.33□□□□□ -0.44
ECHDC2-213ENST00000487040 KMT2BQ9UMN6 2715 aaPredicted RBP12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 ACACAQ13085 2346 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 UBA6A0AVT1 1052 aaPredicted RBP12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 B4E171 279 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 GOLGA8KD6RF30 607 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 GOLGA8TH3BQL2 631 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 MATN2O00339 956 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 NVLO15381 856 aaKnown RBP12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 CAPN5O15484 640 aaPredicted RBP12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 RRP8O43159 456 aaKnown RBP12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 GPC4O75487 556 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 MPSTP25325 297 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 AOAHP28039 575 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 CCR7P32248 378 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 TSPAN7P41732 249 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 TUBB2AQ13885 445 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 CRYMQ14894 314 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 BBS9Q3SYG4 887 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 SPANXN3Q5MJ09 141 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 CENPUQ71F23 418 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 PRSS42Q7Z5A4 293 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 TBC1D21Q8IYX1 336 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 SLC22A15Q8IZD6 547 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 CARFQ8N187 725 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 RCBTB1Q8NDN9 531 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 ZNF248Q8NDW4 579 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 GSDMBQ8TAX9 411 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 RSC1A1Q92681 617 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 C9orf72Q96LT7 481 aa12.32□□□□□ -0.44
ECHDC2-213ENST00000487040 TGM7Q96PF1 710 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms