RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 POMGNT1Q8WZA1 660 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 RSPRY1Q96DX4 576 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ERLEC1Q96DZ1 483 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 B3GALT6Q96L58 329 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PRICKLE1Q96MT3 831 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 PANX2Q96RD6 677 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PKP4Q99569 1192 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 BARD1Q99728 777 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 DDX23Q9BUQ8 820 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 ZNF717Q9BY31 904 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 NAPBQ9H115 298 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 RHBGQ9H310 441 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PABPC3Q9H361 631 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 TAF1DQ9H5J8 278 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 SYNDIG1Q9H7V2 258 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ERVMER34-1Q9H9K5 563 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 SIAEQ9HAT2 523 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 RAVER2Q9HCJ3 691 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 MRPS30Q9NP92 439 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 SLC35C2Q9NQQ7 365 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 GJB4Q9NTQ9 266 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 DDX28Q9NUL7 540 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 RCOR3Q9P2K3 495 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 UXTQ9UBK9 157 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 IL19Q9UHD0 177 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 IPO11Q9UI26 975 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 GJD2Q9UKL4 321 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PADI4Q9UM07 663 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 C19orf53Q9UNZ5 99 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 ACOT9Q9Y305 439 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ZFP37Q9Y6Q3 630 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 PLXNC1O60486 1568 aa5.4□□□□□ -1.55
COPS3-209ENST00000486810 AFF2P51816 1311 aa5.4□□□□□ -1.55
COPS3-209ENST00000486810 KIF14Q15058 1648 aa5.4□□□□□ -1.55
COPS3-209ENST00000486810 MYH7P12883 1935 aa5.4□□□□□ -1.55
COPS3-209ENST00000486810 PNPLA6Q8IY17 1366 aa5.4□□□□□ -1.55
COPS3-209ENST00000486810 PARD3Q8TEW0 1356 aa5.4□□□□□ -1.55
COPS3-209ENST00000486810 PCSK5Q92824 1860 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 MTMR11A4FU01 709 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 MANSC4A6NHS7 340 aaPredicted RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 HMX3A6NHT5 357 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 CGB1A6NKQ9 187 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 EVPLLA8MZ36 301 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 F8W036 122 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 AP4M1O00189 453 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 QSOX1O00391 747 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 SLC22A2O15244 555 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 CLDN3O15551 220 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 PEX11AO75192 247 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 TRMUO75648 421 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 SULT1C4O75897 302 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 C1RP00736 705 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 PGK2P07205 417 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 ACAA1P09110 424 aaPredicted RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 ATP5F1P24539 256 aaPredicted RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 FPR3P25089 353 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 PON1P27169 355 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 MAPK3P27361 379 aaPredicted RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 TNFRSF8P28908 595 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 SLC15A1P46059 708 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 RPL5P46777 297 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 CCT3P49368 545 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 SUCLG1P53597 346 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 TPTEP56180 551 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 TIRAPP58753 221 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 SPCS3P61009 180 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 NCALDP61601 193 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 RPP30P78346 268 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 POU6F1Q14863 301 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 LTB4RQ15722 352 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 SMTNL2Q2TAL5 461 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 EDRF1Q3B7T1 1238 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 PXDC1Q5TGL8 231 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 RRAGBQ5VZM2 374 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 RESP18Q5W5W9 173 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 PTRHD1Q6GMV3 140 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 ITPRIPL1Q6GPH6 555 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 RETSATQ6NUM9 610 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 ARMCX5Q6P1M9 558 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 EMBQ6PCB8 327 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 SYCE2Q6PIF2 218 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 LDHAL6AQ6ZMR3 332 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 MEX3BQ6ZN04 569 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 RALGPS2Q86X27 583 aaPredicted RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 TBC1D10CQ8IV04 446 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 LIX1LQ8IVB5 337 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 BBS7Q8IWZ6 715 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 IQCKQ8N0W5 287 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 ZNF321PQ8N8H1 164 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 ZNF527Q8NB42 609 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 HUS1BQ8NHY5 278 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 AENQ8WTP8 325 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 GTF3AQ92664 365 aaKnown RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 SYN2Q92777 582 aaPredicted RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 ZNF486Q96H40 463 aaPredicted RBP5.39□□□□□ -1.55
COPS3-209ENST00000486810 WDYHV1Q96HA8 205 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 TMEM80Q96HE8 168 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 VCPIP1Q96JH7 1222 aa5.39□□□□□ -1.55
COPS3-209ENST00000486810 FAM227BQ96M60 508 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms