RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SDC4P31431 198 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 CBSP35520 551 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 SYKP43405 635 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 CHRNA4P43681 627 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 TNFSF10P50591 281 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 RENBPP51606 427 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 NDUFA8P51970 172 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 CASP6P55212 293 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 RBPJQ06330 500 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 IL10RBQ08334 325 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 ADCY2Q08462 1091 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 INSCQ1MX18 579 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 FOXD4L6Q3SYB3 417 aaPredicted RBP7.99□□□□□ -1.13
XRN1-212ENST00000486211 TDRD12Q587J7 1177 aaKnown RBP7.99□□□□□ -1.13
XRN1-212ENST00000486211 KLHL35Q6PF15 583 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 CRTC3Q6UUV7 619 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 ISLR2Q6UXK2 745 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 FOXD4L3Q6VB84 417 aaPredicted RBP7.99□□□□□ -1.13
XRN1-212ENST00000486211 LINC00696Q6ZRV3 163 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 B4GALNT4Q76KP1 1039 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 ADGRG6Q86SQ4 1221 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 RAVER1Q8IY67 606 aaKnown RBP7.99□□□□□ -1.13
XRN1-212ENST00000486211 CARFQ8N187 725 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 WFDC11Q8NEX6 87 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 FAM172AQ8WUF8 416 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 LMF1Q96S06 567 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 TIMM29Q9BSF4 260 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 LHPPQ9H008 270 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 OR2AG1Q9H205 316 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 FANCEQ9HB96 536 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 NEUROD4Q9HD90 331 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 ARFGAP3Q9NP61 516 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 GPATCH2LQ9NWQ4 482 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 SOHLH2Q9NX45 425 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 DTLQ9NZJ0 730 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 ZNF232Q9UNY5 417 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 ANKRD12Q6UB98 2062 aa7.99□□□□□ -1.13
XRN1-212ENST00000486211 HCFC1P51610 2035 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 TRAV17A0A0B4J275 112 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 A0A0J9YYE9 177 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 SLC9B1P1A6NJY1 282 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 GPR89AB7ZAQ6 455 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 H3BMH7 237 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 PROM1O43490 865 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 VEGFDO43915 354 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 MTA2O94776 668 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 PEX11BO96011 259 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 TRBC1P01850 177 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 GPR89BP0CG08 455 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 CYP11B1P15538 503 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 SLC9A1P19634 815 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 RFC1P35251 1148 aaPredicted RBP7.98□□□□□ -1.13
XRN1-212ENST00000486211 YBX1P67809 324 aaKnown RBP7.98□□□□□ -1.13
XRN1-212ENST00000486211 TFF3Q07654 80 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 C8orf34Q49A92 452 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 ARMC12Q5T9G4 340 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 ZNF658Q5TYW1 1059 aaPredicted RBP7.98□□□□□ -1.13
XRN1-212ENST00000486211 C11orf96Q7Z7L8 435 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 DMRTC2Q8IXT2 367 aaPredicted RBP7.98□□□□□ -1.13
XRN1-212ENST00000486211 NPWQ8N729 165 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 PHF10Q8WUB8 498 aaKnown RBP7.98□□□□□ -1.13
XRN1-212ENST00000486211 NACC2Q96BF6 587 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 FAM81BQ96LP2 452 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 C17orf62Q9BQA9 187 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 MGME1Q9BQP7 344 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 ZNF559Q9BR84 538 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 CRACR2AQ9BSW2 395 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 SP110Q9HB58 689 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 SYTL2Q9HCH5 934 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 HRASLS2Q9NWW9 162 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 APEX2Q9UBZ4 518 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 TRIM10Q9UDY6 481 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 KCNN3Q9UGI6 736 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 FZD10Q9ULW2 581 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 CDYLQ9Y232 598 aa7.98□□□□□ -1.13
XRN1-212ENST00000486211 FOXO6A8MYZ6 492 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 E7EQ34 232 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 FOXN3O00409 490 aaPredicted RBP7.97□□□□□ -1.13
XRN1-212ENST00000486211 ADAM10O14672 748 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 KMOO15229 486 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 ZNF202O95125 648 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 CLDN7O95471 211 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 LY6G6DO95868 133 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 CRYABP02511 175 aaKnown RBP7.97□□□□□ -1.13
XRN1-212ENST00000486211 HBQ1P09105 142 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 UNGP13051 313 aaPredicted RBP7.97□□□□□ -1.13
XRN1-212ENST00000486211 UGT1A4P22310 534 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 MMP11P24347 488 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 PCSK6P29122 969 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 ADSLP30566 484 aaPredicted RBP7.97□□□□□ -1.13
XRN1-212ENST00000486211 HSPA9P38646 679 aaKnown RBP7.97□□□□□ -1.13
XRN1-212ENST00000486211 SPINT3P49223 89 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 NOMO3P69849 1222 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 ARG2P78540 354 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 IHHQ14623 411 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 RPE65Q16518 533 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 TBCELQ5QJ74 424 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 C1orf189Q5VU69 101 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 IRAK1BP1Q5VVH5 260 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms