RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZNF549Q6P9A3 640 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 IYDQ6PHW0 289 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 OGFOD3Q6PK18 319 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 ABRAXAS1Q6UWZ7 409 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 NAPRTQ6XQN6 538 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 PIP4P1Q86T03 277 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 PDZD3Q86UT5 571 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 ZC3HC1Q86WB0 502 aaKnown RBP11.15□□□□□ -0.62
NUP50-216ENST00000486184 SLC35F3Q8IY50 421 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 NAGSQ8N159 534 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 LILRA3Q8N6C8 439 aaPredicted RBP11.15□□□□□ -0.62
NUP50-216ENST00000486184 GPR156Q8NFN8 814 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 SH3KBP1Q96B97 665 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 TSPAN17Q96FV3 270 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 FOPNLQ96NB1 174 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 GPR21Q99679 349 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 VWA7Q9Y334 891 aa11.15□□□□□ -0.62
NUP50-216ENST00000486184 GOLGA4Q13439 2230 aaKnown RBP11.15□□□□□ -0.63
NUP50-216ENST00000486184 SLC5A10A0PJK1 596 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 OR52A4PA6NMU1 304 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 KDM1AO60341 852 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 EML2O95834 649 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 RPN2P04844 631 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 MTHFD1P11586 935 aaKnown RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 CKMT1AP12532 417 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 GLB1P16278 677 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 NDUFS1P28331 727 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 GABRB3P28472 473 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 RGS4P49798 205 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 LIMK2P53671 638 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 HHEXQ03014 270 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 SLC29A2Q14542 456 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 NAA30Q147X3 362 aaPredicted RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 CCDC157Q569K6 752 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 RBM20Q5T481 1227 aaKnown RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 LRRC8EQ6NSJ5 796 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 EFL1Q7Z2Z2 1120 aaKnown RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 SLC22A15Q8IZD6 547 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 SFRP1Q8N474 314 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 ARL14Q8N4G2 192 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 SIDT2Q8NBJ9 832 aaKnown RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 BAHD1Q8TBE0 780 aaPredicted RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 SLC37A2Q8TED4 501 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 AENQ8WTP8 325 aaKnown RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 PATE1Q8WXA2 126 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 INPP5DQ92835 1189 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 CAVIN3Q969G5 261 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 RMDN2Q96LZ7 410 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 PAFAH2Q99487 392 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 SLC38A3Q99624 504 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 FUT8Q9BYC5 575 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 TXLNGYQ9BZA5 131 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 OR52A5Q9H2C5 316 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 SYNDIG1Q9H7V2 258 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 POT1Q9NUX5 634 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 LRIT1Q9P2V4 623 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 CPNE7Q9UBL6 633 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 RAB21Q9UL25 225 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 SLC39A10Q9ULF5 831 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 WDR37Q9Y2I8 494 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 CFAP20Q9Y6A4 193 aaKnown RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 COLEC10Q9Y6Z7 277 aa11.14□□□□□ -0.63
NUP50-216ENST00000486184 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
NUP50-216ENST00000486184 A6NCN8 305 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 PABPN1LA6NDY0 278 aaKnown RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 PRR19A6NJB7 356 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 NUDT21O43809 227 aaKnown RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 CBFA2T3O75081 653 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 GPC4O75487 556 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 KRT38O76015 456 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 ITGA2BP08514 1039 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 CBSLP0DN79 551 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 MYF5P13349 255 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 CEACAM1P13688 526 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 ENO3P13929 434 aaPredicted RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 BRAFP15056 766 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 STMN1P16949 149 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 XRCC1P18887 633 aaPredicted RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 FDXRP22570 491 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 ACP1P24666 158 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 PDHA2P29803 388 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 ATP5DP30049 168 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 CBSP35520 551 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 MAPK9P45984 424 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 FASLGP48023 281 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 SERPINB9P50453 376 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 CLCN7P51798 805 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 POU4F1Q01851 419 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 DNAJC3Q13217 504 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 USP10Q14694 798 aaKnown RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 CLCA4Q14CN2 919 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 PLCL1Q15111 1095 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 RPE65Q16518 533 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 ZNF658BQ4V348 819 aaPredicted RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 UBAP2Q5T6F2 1119 aaKnown RBP11.13□□□□□ -0.63
NUP50-216ENST00000486184 LGSNQ5TDP6 509 aa11.13□□□□□ -0.63
NUP50-216ENST00000486184 TTC23LQ6PF05 361 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms