RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TREX1Q9NSU2 369 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 RNF14Q9UBS8 474 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 GNPTGQ9UJJ9 305 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 MYLKQ15746 1914 aa12.21□□□□□ -0.46
PTCD1-205ENST00000485746 RP1P56715 2156 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 ACACBO00763 2458 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 MN1Q10571 1320 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 SCN8AQ9UQD0 1980 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 B4E171 279 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 GOLGA8KD6RF30 607 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 GOLGA8TH3BQL2 631 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 TMEM63AO94886 807 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 C9P02748 559 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 POLR2CP19387 275 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 CD82P27701 267 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 TSPAN7P41732 249 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 ARCN1P48444 511 aaKnown RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 UCNP55089 124 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 EIF3BP55884 814 aaKnown RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 CXADRP78310 365 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 DR1Q01658 176 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 HSPA14Q0VDF9 509 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 PRKG2Q13237 762 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 SEMA3AQ14563 771 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 DNAJC21Q5F1R6 531 aaKnown RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 DNTTIP2Q5QJE6 756 aaKnown RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 ARMC3Q5W041 872 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 CEACAM20Q6UY09 585 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 SYDE1Q6ZW31 735 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 CAND1Q86VP6 1230 aaKnown RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 HOOK3Q86VS8 718 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 CREG2Q8IUH2 290 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 MPP5Q8N3R9 675 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 ACVR1CQ8NER5 493 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 ZNF669Q96BR6 464 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 SERPINB12Q96P63 405 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 PANX3Q96QZ0 392 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 CTRCQ99895 268 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 HGH1Q9BTY7 390 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 CARD6Q9BX69 1037 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 FOXJ2Q9P0K8 574 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 MARCH4Q9P2E8 410 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 EPHA6Q9UF33 1036 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 PCYOX1Q9UHG3 505 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 SLC24A2Q9UI40 661 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 ASF1AQ9Y294 204 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 TDRKHQ9Y2W6 561 aaKnown RBP12.2□□□□□ -0.46
PTCD1-205ENST00000485746 NEU2Q9Y3R4 380 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 RPS6KL1Q9Y6S9 549 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
PTCD1-205ENST00000485746 KNTC1P50748 2209 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 FRYQ5TBA9 3013 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 FAM237BA0A1B0GVD1 139 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 GSAPA4D1B5 854 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 OR5K3A6NET4 321 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 IQCF5A8MTL0 148 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 C9orf172C9J069 976 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 CCDC188H7C350 402 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 DNALI1O14645 258 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 POLR1CO15160 346 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 TOX3O15405 576 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 KDM1AO60341 852 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 APOA4P06727 396 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 FMO4P31512 558 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 ATP1A2P50993 1020 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 TMPRSS3P57727 454 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 MC2RQ01718 297 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 TLE3Q04726 772 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 PTK6Q13882 451 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 ANKRD20A4Q4UJ75 823 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 MANEAQ5SRI9 462 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 RNF187Q5TA31 235 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 IZUMO3Q5VZ72 239 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 ANKS6Q68DC2 871 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 KIAA0930Q6ICG6 404 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 CYB5D1Q6P9G0 228 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 PDZD3Q86UT5 571 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 LRRC6Q86X45 466 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 KRT222Q8N1A0 295 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 C17orf53Q8N3J3 647 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 NAT8LQ8N9F0 302 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 SIDT2Q8NBJ9 832 aaKnown RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 CFAP61Q8NHU2 1237 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 SKA2Q8WVK7 121 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 ASZ1Q8WWH4 475 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 UBXN4Q92575 508 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 TEFMQ96QE5 360 aaKnown RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 DDA1Q9BW61 102 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 B3GNT4Q9C0J1 378 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 TRIT1Q9H3H1 467 aaKnown RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 FBXO8Q9NRD0 319 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 B3GALT1Q9Y5Z6 326 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 SPEGQ15772 3267 aa12.19□□□□□ -0.46
PTCD1-205ENST00000485746 TPRP12270 2363 aaKnown RBP12.19□□□□□ -0.46
PTCD1-205ENST00000485746 ARHGEF17Q96PE2 2063 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 SLC5A10A0PJK1 596 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 E5RI56 91 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 STMND1H3BQB6 276 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 KPNA5O15131 536 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms